RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 STAM2O75886 525 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 AKAP3O75969 853 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 GALTP07902 379 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 SLC3A2P08195 630 aaKnown RBP5.03□□□□□ -1.6
BRCA1-217ENST00000487825 TOP1P11387 765 aaKnown RBP5.03□□□□□ -1.6
BRCA1-217ENST00000487825 COPAP53621 1224 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 SP4Q02446 784 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 PFKFB3Q16875 520 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-217ENST00000487825 ZSCAN25Q6NSZ9 544 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 ERC1Q8IUD2 1116 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 WDR75Q8IWA0 830 aaKnown RBP5.03□□□□□ -1.6
BRCA1-217ENST00000487825 SDR16C5Q8N3Y7 309 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 CHCHD4Q8N4Q1 142 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 FAM3CQ92520 227 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 ARHGAP45Q92619 1136 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 HIC2Q96JB3 615 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 RPS6KC1Q96S38 1066 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 SENP7Q9BQF6 1050 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 TMEM47Q9BQJ4 181 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 WACQ9BTA9 647 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 FOXP1Q9H334 677 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-217ENST00000487825 PLEKHA4Q9H4M7 779 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 SLC32A1Q9H598 525 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 MRPL17Q9NRX2 175 aaKnown RBP5.03□□□□□ -1.6
BRCA1-217ENST00000487825 MAP3K20Q9NYL2 800 aaKnown RBP5.03□□□□□ -1.6
BRCA1-217ENST00000487825 MAFFQ9ULX9 164 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 CAPN11Q9UMQ6 739 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 CORO2BQ9UQ03 480 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 GINS2Q9Y248 185 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 ITPR3Q14573 2671 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 ARID2Q68CP9 1835 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 GSTTP1A0A1W2PQM5 241 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 IKBKBO14920 756 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 GPAA1O43292 621 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 ECI2O75521 394 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 URODP06132 367 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 HOXC13P31276 330 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 GALNSP34059 522 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 HTR7P34969 479 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 RDXP35241 583 aaKnown RBP5.02□□□□□ -1.61
BRCA1-217ENST00000487825 ID2Q02363 134 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 CFHR1Q03591 330 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 CCDC15Q0P6D6 951 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 KPNB1Q14974 876 aaKnown RBP5.02□□□□□ -1.61
BRCA1-217ENST00000487825 PLCB4Q15147 1175 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 QRICH1Q2TAL8 776 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 PLK5Q496M5 336 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 GPATCH4Q5T3I0 446 aaKnown RBP5.02□□□□□ -1.61
BRCA1-217ENST00000487825 GRHL2Q6ISB3 625 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 ANO7Q6IWH7 933 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 CCNI2Q6ZMN8 369 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-217ENST00000487825 PIP4P1Q86T03 277 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 SAMD3Q8N6K7 520 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 TRAPPC12Q8WVT3 735 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 ZDHHC12Q96GR4 267 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 ADGRE3Q9BY15 652 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 SLC25A32Q9H2D1 315 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 CPVLQ9H3G5 476 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 BOLA2Q9H3K6 86 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 SMARCAD1Q9H4L7 1026 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 IL1RAPL2Q9NP60 686 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 C2orf42Q9NWW7 574 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 FZD4Q9ULV1 537 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 CREBBPQ92793 2442 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 FLNCQ14315 2725 aa5.02□□□□□ -1.61
BRCA1-217ENST00000487825 HELZP42694 1942 aaKnown RBP5.01□□□□□ -1.61
BRCA1-217ENST00000487825 LY6G6EA0A0G2JKS1 128 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 A0A0U1RQF3 1178 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 BCLAF3A2AJT9 711 aaKnown RBP5.01□□□□□ -1.61
BRCA1-217ENST00000487825 MYMKA6NI61 221 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 TRIM38O00635 465 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 CAPN9O14815 690 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 CAVIN2O95810 425 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 ANXA2P07355 339 aaKnown RBP5.01□□□□□ -1.61
BRCA1-217ENST00000487825 TMEM191BP0C7N4 346 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 CCDC192P0DO97 292 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 TACR3P29371 465 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 HOXA13P31271 388 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-217ENST00000487825 SLC11A1P49279 550 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 CRYBB1P53674 252 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-217ENST00000487825 AK2P54819 239 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 NTHL1P78549 312 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 CREB5Q02930 508 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 FHL3Q13643 280 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 CLCA4Q14CN2 919 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 Q6ZS52 159 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 ANKRD13BQ86YJ7 626 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 RNF168Q8IYW5 571 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-217ENST00000487825 ITFG1Q8TB96 612 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 SPATA18Q8TC71 538 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 SEPT1Q8WYJ6 367 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 ELSPBP1Q96BH3 223 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 FAM227BQ96M60 508 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 SELENOOQ9BVL4 669 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 HERC2P3Q9BVR0 1158 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 CINPQ9BW66 212 aaPredicted RBP5.01□□□□□ -1.61
BRCA1-217ENST00000487825 PLA2G2FQ9BZM2 168 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 UBA5Q9GZZ9 404 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 ZCWPW1Q9H0M4 648 aa5.01□□□□□ -1.61
BRCA1-217ENST00000487825 NUP62CLQ9H1M0 184 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms