RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CYP2J2P51589 502 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 IRAK1P51617 712 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 NDST1P52848 882 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 RWDD2BP57060 319 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 TMPRSS3P57727 454 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF445P59923 1031 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 GPR85P60893 370 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 RPS14P62263 151 aaKnown RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 E2F1Q01094 437 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ID3Q02535 119 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 DNAJC3Q13217 504 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 PWP1Q13610 501 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 SEPT6Q14141 434 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 STAT4Q14765 748 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 PPA1Q15181 289 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 MEA1Q16626 185 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 SGSM1Q2NKQ1 1148 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 KCNT1Q5JUK3 1230 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 SH2D4BQ5SQS7 431 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF776Q68DI1 518 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 POMZP3Q6PJE2 187 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 LAYNQ6UX15 382 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 SCARA5Q6ZMJ2 495 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 CLEC20AQ6ZU45 233 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 USP30Q70CQ3 517 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 GALNT7Q86SF2 657 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 TMEM110Q86TL2 294 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 DENND1CQ8IV53 801 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 SULF2Q8IWU5 870 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 LSMEM2Q8N112 164 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ARHGAP18Q8N392 663 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 OXR1Q8N573 874 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 PCYOX1LQ8NBM8 494 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 RBBP8NLQ8NC74 664 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 IPMKQ8NFU5 416 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 TRIM58Q8NG06 486 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF507Q8TCN5 953 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 STK35Q8TDR2 534 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 SAP25Q8TEE9 199 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 SORCS1Q8WY21 1168 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 VPS39Q96JC1 886 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 C16orf45Q96MC5 204 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF578Q96N58 590 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 FANCD2OSQ96PS1 177 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 HNRNPABQ99729 332 aaKnown RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 RSRP1Q9BUV0 290 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 PANK2Q9BZ23 570 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 TMEM245Q9H330 911 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 RABEP2Q9H5N1 569 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 PRSS16Q9NQE7 514 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 AGPAT3Q9NRZ7 376 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 FAM49BQ9NUQ9 324 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 PPP1R14DQ9NXH3 145 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 IFT80Q9P2H3 777 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 ZC3H7BQ9UGR2 993 aaKnown RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 RASAL2Q9UJF2 1139 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 MOSPD1Q9UJG1 213 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 AGO1Q9UL18 857 aaKnown RBP6.93□□□□□ -1.3
HDAC3-209ENST00000486618 CLCA2Q9UQC9 943 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 TENM4Q6N022 2769 aa6.93□□□□□ -1.3
HDAC3-209ENST00000486618 AHCTF1Q8WYP5 2266 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 FAM47DPA6NHR8 397 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 LRRC72A6NJI9 287 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CYSRT1A8MQ03 144 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 HHLA1C9JL84 531 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CBX4O00257 560 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 EXOC3O60645 756 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 MAGEC1O60732 1142 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 DIAPH2O60879 1101 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 GOSR1O95249 250 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 PRNPP04156 253 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 IGHV4-34P06331 123 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 HMBSP08397 361 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 SLFN14P0C7P3 912 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 C6P13671 934 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 POLR2EP19388 210 aaKnown RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 PSMA4P25789 261 aaKnown RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CD38P28907 300 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 EPHA8P29322 1005 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 HOXD13P35453 343 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 HSD17B2P37059 387 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 EIF4A3P38919 411 aaKnown RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 HARS2P49590 506 aaKnown RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 SULT1E1P49888 294 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 ETV1P50549 477 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CLCN2P51788 898 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CLDN6P56747 220 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 KLHL30Q0D2K2 578 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 EFEMP1Q12805 493 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 KIF5AQ12840 1032 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CLPPQ16740 277 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 MMEL1Q495T6 779 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 HS1BP3Q53T59 392 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 PRAMEF14Q5SWL7 426 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CCDC183Q5T5S1 534 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 FAM205BPQ63HN1 556 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 TMEM215Q68D42 235 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 SLC6A19Q695T7 634 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 FCRLBQ6BAA4 426 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms