RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TNFP01375 233 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 KRT10P13645 584 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 HOXB3P14651 431 aaPredicted RBP15.18■□□□□ 0.02
VARS-223ENST00000474643 TGM2P21980 687 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 IL4RP24394 825 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 HSPA9P38646 679 aaKnown RBP15.18■□□□□ 0.02
VARS-223ENST00000474643 SRP54P61011 504 aaKnown RBP15.18■□□□□ 0.02
VARS-223ENST00000474643 CCZ1BP86790 482 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 CCZ1P86791 482 aaPredicted RBP15.18■□□□□ 0.02
VARS-223ENST00000474643 CDCP2Q5VXM1 449 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 DENND2CQ68D51 928 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 NCBP2-AS2Q69YL0 99 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 C11orf63Q6NUN7 778 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 CCDC50Q8IVM0 306 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 SLC35F3Q8IY50 421 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 ARL10Q8N8L6 244 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 PCDH19Q8TAB3 1148 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 ZNF578Q96N58 590 aaPredicted RBP15.18■□□□□ 0.02
VARS-223ENST00000474643 ZNF599Q96NL3 588 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 BOCQ9BWV1 1114 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 HAUS2Q9NVX0 235 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 PADI4Q9UM07 663 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 GPR34Q9UPC5 381 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 DUSP10Q9Y6W6 482 aa15.18■□□□□ 0.02
VARS-223ENST00000474643 ARID1BQ8NFD5 2236 aaPredicted RBP15.18■□□□□ 0.02
VARS-223ENST00000474643 MYLKQ15746 1914 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 LY6G6EA0A0G2JKS1 128 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 A0A1W2PQ67 120 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 MACROD2A1Z1Q3 448 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 EME2A4GXA9 379 aaPredicted RBP15.17■□□□□ 0.02
VARS-223ENST00000474643 BTNL10A8MVZ5 291 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 APOL1O14791 398 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 YY2O15391 372 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 TCEA3O75764 348 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 RECQL5O94762 991 aaPredicted RBP15.17■□□□□ 0.02
VARS-223ENST00000474643 MAP3K6O95382 1288 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 CPP00450 1065 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 RGRP47804 291 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 ITKQ08881 620 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 NSUN2Q08J23 767 aaKnown RBP eCLIP15.17■□□□□ 0.02
VARS-223ENST00000474643 BIRC2Q13490 618 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 ISXQ2M1V0 245 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 ALG11Q2TAA5 492 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 ZNF662Q6ZS27 426 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 TAF8Q7Z7C8 310 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 SDR16C5Q8N3Y7 309 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 KIAA1524Q8TCG1 905 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 GRAMD1AQ96CP6 724 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 CRELD1Q96HD1 420 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 RNF157Q96PX1 679 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 PSKH2Q96QS6 385 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 UBL7Q96S82 380 aaPredicted RBP15.17■□□□□ 0.02
VARS-223ENST00000474643 CCDC3Q9BQI4 270 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 LACRTQ9GZZ8 138 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 WDR26Q9H7D7 661 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 SATB2Q9UPW6 733 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 HEY1Q9Y5J3 304 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 U3KQA8 63 aa15.17■□□□□ 0.02
VARS-223ENST00000474643 CFAP69A5D8W1 941 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 PDE2AO00408 941 aaPredicted RBP15.16■□□□□ 0.02
VARS-223ENST00000474643 PJA2O43164 708 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 ZFXP17010 805 aaPredicted RBP15.16■□□□□ 0.02
VARS-223ENST00000474643 MX2P20592 715 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 LSSP48449 732 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 DYNLT1P63172 113 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 CXADRP78310 365 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 ARHGEF7Q14155 803 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 PAFAH1B3Q15102 231 aaKnown RBP15.16■□□□□ 0.02
VARS-223ENST00000474643 MARC1Q5VT66 337 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 KAZNQ674X7 775 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 TIGD7Q6NT04 549 aaPredicted RBP15.16■□□□□ 0.02
VARS-223ENST00000474643 LVRNQ6Q4G3 990 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 LRRC49Q8IUZ0 686 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 NDUFAF2Q8N183 169 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 ARL14Q8N4G2 192 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 KYQ8NBH2 561 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 CCNYQ8ND76 341 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 OR6C4Q8NGE1 309 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 OR56A4Q8NGH8 313 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 UBE2Q2Q8WVN8 375 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 KCNE4Q8WWG9 221 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 FAF2Q96CS3 445 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 ATXN7L3BQ96GX2 97 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 GFM1Q96RP9 751 aaKnown RBP15.16■□□□□ 0.02
VARS-223ENST00000474643 STRADBQ9C0K7 418 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 SUDS3Q9H7L9 328 aaPredicted RBP15.16■□□□□ 0.02
VARS-223ENST00000474643 TTLL3Q9Y4R7 772 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 ATRXP46100 2492 aa15.16■□□□□ 0.02
VARS-223ENST00000474643 B4DGG1 531 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 MAFKO60675 156 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 SOCS5O75159 536 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 ZRANB2O95218 330 aaKnown RBP eCLIP15.15■□□□□ 0.02
VARS-223ENST00000474643 CELA2BP08218 269 aaPredicted RBP15.15■□□□□ 0.02
VARS-223ENST00000474643 CYP2A6P11509 494 aaPredicted RBP15.15■□□□□ 0.02
VARS-223ENST00000474643 GARSP41250 739 aaKnown RBP15.15■□□□□ 0.02
VARS-223ENST00000474643 MMP13P45452 471 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 UCNP55089 124 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 ERVPABLB-1P60509 514 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 GBE1Q04446 702 aa15.15■□□□□ 0.02
VARS-223ENST00000474643 SLC10A7Q0GE19 358 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms