RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 KIAA1024LP59773 190 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 POLR2LP62875 67 aaKnown RBP10.88□□□□□ -0.67
SF3A1-203ENST00000444440 E2F1Q01094 437 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 ZBTB17Q13105 803 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 NR0B2Q15466 257 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 IFI16Q16666 785 aaKnown RBP10.88□□□□□ -0.67
SF3A1-203ENST00000444440 PNCKQ6P2M8 343 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 Q6ZVL8 140 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 CACTIN-AS1Q8N1I8 211 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 PAF1Q8N7H5 531 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 CNTD1Q8N815 330 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 MAPK15Q8TD08 544 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 HNRNPLLQ8WVV9 542 aaKnown RBP10.88□□□□□ -0.67
SF3A1-203ENST00000444440 HDAC11Q96DB2 347 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 NXPE2Q96DL1 559 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 NUS1Q96E22 293 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 DTD2Q96FN9 168 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 RBM15Q96T37 977 aaKnown RBP eCLIP10.88□□□□□ -0.67
SF3A1-203ENST00000444440 TDRD1Q9BXT4 1180 aaKnown RBP10.88□□□□□ -0.67
SF3A1-203ENST00000444440 CEP41Q9BYV8 373 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 NRSN2Q9GZP1 204 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 TMEM168Q9H0V1 697 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 RBM22Q9NW64 420 aaKnown RBP eCLIP10.88□□□□□ -0.67
SF3A1-203ENST00000444440 LCMT1Q9UIC8 334 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 LHX6Q9UPM6 363 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 CHKBQ9Y259 395 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 PPIL1Q9Y3C6 166 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 TTLL3Q9Y4R7 772 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 IGSF10Q6WRI0 2623 aa10.88□□□□□ -0.67
SF3A1-203ENST00000444440 LRRD1A4D1F6 860 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 KCNK1O00180 336 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 MPOP05164 745 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 ANXA6P08133 673 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 KRT7P08729 469 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 CCNB1P14635 433 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 ITPKBP27987 946 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 POLD2P49005 469 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 DUSP3P51452 185 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-203ENST00000444440 PTSQ03393 145 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 ADCY2Q08462 1091 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 PPIDQ08752 370 aaKnown RBP10.87□□□□□ -0.67
SF3A1-203ENST00000444440 ITKQ08881 620 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 LLGL1Q15334 1064 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 RALGPS1Q5JS13 557 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 ARMC12Q5T9G4 340 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 LRRC66Q68CR7 880 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 SLC9A4Q6AI14 798 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 TECPR1Q7Z6L1 1165 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 HEATR4Q86WZ0 1026 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 LRRC49Q8IUZ0 686 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 OR56A4Q8NGH8 313 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 NSMCE1Q8WV22 266 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 FATE1Q969F0 183 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 SCRN2Q96FV2 425 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 WDR24Q96S15 920 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 AGAP2Q99490 1192 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 POLR1EQ9GZS1 481 aaKnown RBP10.87□□□□□ -0.67
SF3A1-203ENST00000444440 BRD8Q9H0E9 1235 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 RBSNQ9H1K0 784 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 SUDS3Q9H7L9 328 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-203ENST00000444440 USP29Q9HBJ7 922 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 CYP4F12Q9HCS2 524 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 PCYT1BQ9Y5K3 369 aaPredicted RBP10.87□□□□□ -0.67
SF3A1-203ENST00000444440 ENTPD2Q9Y5L3 495 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 AK5Q9Y6K8 562 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 DGKBQ9Y6T7 804 aa10.87□□□□□ -0.67
SF3A1-203ENST00000444440 BSNQ9UPA5 3926 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 A0A0J9YYE9 177 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 PRSS38A1L453 326 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 NOBOXO60393 691 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 JCHAINP01591 159 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 TRBC1P01850 177 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 KRT1P04264 644 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 CEACAM5P06731 702 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 HOXC4P09017 264 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 CYP2A6P11509 494 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 MYCLP1P12525 358 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 TNNT1P13805 278 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 CTSEP14091 401 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 COMTP21964 271 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 HTR1BP28222 390 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 ARHGAP25P42331 645 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 NOP2P46087 812 aaKnown RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 MARCKSL1P49006 195 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 SKOR1P84550 965 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 CDK3Q00526 305 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 TCEAL1Q15170 157 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 ELOCQ15369 112 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 ISXQ2M1V0 245 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 ZFYVE27Q5T4F4 411 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 TIGD7Q6NT04 549 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 MFSD7Q6UXD7 560 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 TRIM74Q86UV6 250 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 NRROSQ86YC3 692 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 RHOT2Q8IXI1 618 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 CCDC13Q8IYE1 715 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 BBS5Q8N3I7 341 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 FSTL5Q8N475 847 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-203ENST00000444440 GPR156Q8NFN8 814 aa10.86□□□□□ -0.67
SF3A1-203ENST00000444440 SCAMP4Q969E2 229 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms