RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PSTPIP1O43586 416 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 SPOPO43791 374 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 NDUFA10O95299 355 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 TRBC1P01850 177 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 FUCA1P04066 466 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 KRT10P13645 584 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 HTR1BP28222 390 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 CYLC1P35663 651 aaPredicted RBP18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 MARCKSL1P49006 195 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 DYNLT1P63172 113 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 E2F1Q01094 437 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 SPA17Q15506 151 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 CDKN3Q16667 212 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 CDCP2Q5VXM1 449 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 RD3Q7Z3Z2 195 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 PROSER1Q86XN7 944 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 TMTC1Q8IUR5 882 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 CACTIN-AS1Q8N1I8 211 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 NUS1Q96E22 293 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 PDXPQ96GD0 296 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 CEP41Q9BYV8 373 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 USP29Q9HBJ7 922 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 FGF22Q9HCT0 170 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 MRPL40Q9NQ50 206 aaKnown RBP18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 TTLL3Q9Y4R7 772 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 DGKBQ9Y6T7 804 aa18.34■□□□□ 0.53
SMARCAL1-205ENST00000425815 EME2A4GXA9 379 aaPredicted RBP18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 CASC3O15234 703 aaKnown RBP18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 OPA1O60313 960 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 RASGRP1O95267 797 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 MT-CO3P00414 261 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 GP1BAP07359 652 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 ZFXP17010 805 aaPredicted RBP18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 BLKP51451 505 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 CYP4F3Q08477 520 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 AP1B1Q10567 949 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 PDK1Q15118 436 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 TCEA2Q15560 299 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 C6orf132Q5T0Z8 1188 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 LRRC66Q68CR7 880 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 GUSBP11Q6P575 273 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 SPOCD1Q6ZMY3 1216 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 USP45Q70EL2 814 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 SLC35F3Q8IY50 421 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 PDCD7Q8N8D1 485 aaKnown RBP18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 DCBLD1Q8N8Z6 715 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 OR56A4Q8NGH8 313 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 IFI44Q8TCB0 444 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 KRT35Q92764 455 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 TEX101Q9BY14 249 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 LACRTQ9GZZ8 138 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 CCDC86Q9H6F5 360 aaKnown RBP18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 KLQ9UEF7 1012 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 LAMA5O15230 3695 aa18.33■□□□□ 0.52
SMARCAL1-205ENST00000425815 LRRK1Q38SD2 2015 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 CACNB4O00305 520 aaPredicted RBP18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 TNFRSF10CO14798 259 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 SOD1P00441 154 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 TNFP01375 233 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 ANXA6P08133 673 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 PECAM1P16284 738 aaPredicted RBP18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 CD86P42081 329 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 DUSP3P51452 185 aaPredicted RBP18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 DPTQ07507 201 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 C11orf63Q6NUN7 778 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 TMEM139Q8IV31 216 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 KATNAL2Q8IYT4 538 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 FSTL5Q8N475 847 aaPredicted RBP18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 PTCD2Q8WV60 388 aaKnown RBP18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 TADA1Q96BN2 335 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 ZNF830Q96NB3 372 aaPredicted RBP18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 RBM15Q96T37 977 aaKnown RBP eCLIP18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 ABCG8Q9H221 673 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 WDR26Q9H7D7 661 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 PCDH9Q9HC56 1237 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 DKK4Q9UBT3 224 aa18.32■□□□□ 0.52
SMARCAL1-205ENST00000425815 CPED1A4D0V7 1026 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 CST8O60676 142 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 CLDN7O95471 211 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 CEACAM5P06731 702 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 CTSEP14091 401 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 NFKBIAP25963 317 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 STC1P52823 247 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 ARHGEF7Q14155 803 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 PRKD1Q15139 912 aaPredicted RBP18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 ELOCQ15369 112 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 NR0B2Q15466 257 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 QPCTQ16769 361 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 PERM1Q5SV97 790 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 KAZNQ674X7 775 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 LVRNQ6Q4G3 990 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 RCOR2Q8IZ40 523 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 LPCAT1Q8NF37 534 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 CCL4L1Q8NHW4 92 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 SCAMP4Q969E2 229 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 IMP4Q96G21 291 aaKnown RBP18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 AGAP3Q96P47 875 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 TRIB3Q96RU7 358 aa18.31■□□□□ 0.52
SMARCAL1-205ENST00000425815 WDR24Q96S15 920 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms