RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 LEXMQ3ZCV2 418 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 ZNF667Q5HYK9 610 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 FAM83HQ6ZRV2 1179 aaPredicted RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 MOB3CQ70IA8 216 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 RRM2BQ7LG56 351 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 PALB2Q86YC2 1186 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 CCDC83Q8IWF9 413 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 LRRC8AQ8IWT6 810 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 CEP57L1Q8IYX8 460 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 SPC24Q8NBT2 197 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 C7orf57Q8NEG2 295 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 ENGASEQ8NFI3 743 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 RASSF8Q8NHQ8 419 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 SCARB1Q8WTV0 552 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 TBC1D22AQ8WUA7 517 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 SLC35F5Q8WV83 523 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 TMEM170AQ8WVE7 144 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 EVI5LQ96CN4 794 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 RNF183Q96D59 192 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 RRP36Q96EU6 259 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 C16orf45Q96MC5 204 aaPredicted RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 NAP1L4Q99733 375 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 BPIFA3Q9BQP9 254 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 LLPHQ9BRT6 129 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 POLDIP3Q9BY77 421 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 LHPPQ9H008 270 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 PAIP1Q9H074 479 aaKnown RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 JMJD4Q9H9V9 463 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 VEZTQ9HBM0 779 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 SIRT3Q9NTG7 399 aaPredicted RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 ANO10Q9NW15 660 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 STK26Q9P289 416 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 SLC25A10Q9UBX3 287 aaPredicted RBP2.78□□□□□ -1.96
VPS41-206ENST00000418457 EXOC6BQ9Y2D4 811 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 TMEM98Q9Y2Y6 226 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 PCDHGB5Q9Y5G0 923 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 KDM3BQ7LBC6 1761 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 PEAK1Q9H792 1746 aa2.78□□□□□ -1.96
VPS41-206ENST00000418457 USP6P35125 1406 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 JCADQ9P266 1359 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 IGSF1Q8N6C5 1336 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 TEX13CA0A0J9YWL9 993 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 A0A0U1RQG5 324 aaPredicted RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 RPS10-NUDT3A0A1W2PQS6 291 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 AP5Z1O43299 807 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 KINO60870 393 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 SURF6O75683 361 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 F9P00740 461 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 CRYABP02511 175 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 CYP1A2P05177 515 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 IGKV2-30P06310 120 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 TUBBP07437 444 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 SKILP12757 684 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 COX7A2P14406 83 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 SLC2A4P14672 509 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ARSBP15848 533 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 H2AFXP16104 143 aaPredicted RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 ZNF8P17098 575 aaPredicted RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 POU1F1P28069 291 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ABCD3P28288 659 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 KRT9P35527 623 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 KCNJ4P48050 445 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 CENPAP49450 140 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 P2RX3P56373 397 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 SELENOVP59797 346 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 UFM1P61960 85 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 CYP4A11Q02928 519 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 TUBB2AQ13885 445 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 GPR18Q14330 331 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 TAF11Q15544 211 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ZRSR1Q15695 479 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 DUSP6Q16828 381 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ZNF260Q3ZCT1 412 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 FAM69AQ5T7M9 428 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 DCAF12L2Q5VW00 463 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 DAB2IPQ5VWQ8 1189 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ATG9BQ674R7 924 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ACAD10Q6JQN1 1059 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 TMEM81Q6P7N7 255 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 BLOC1S2Q6QNY1 142 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 TMCO3Q6UWJ1 677 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 CCDC73Q6ZRK6 1079 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 Q6ZTK2 550 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 CTU1Q7Z7A3 348 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 TADA2BQ86TJ2 420 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 LUZP1Q86V48 1076 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 FAM160B2Q86V87 743 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ARMC8Q8IUR7 673 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 LURAP1LQ8IV03 231 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 RBFAQ8N0V3 343 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 CCAR2Q8N163 923 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 C17orf53Q8N3J3 647 aaPredicted RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 PLD5Q8N7P1 536 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 C11orf65Q8NCR3 313 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 ZUFSPQ96AP4 578 aa2.77□□□□□ -1.97
VPS41-206ENST00000418457 JAKMIP1Q96N16 626 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 ZNF396Q96N95 335 aaPredicted RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 GFM1Q96RP9 751 aaKnown RBP2.77□□□□□ -1.97
VPS41-206ENST00000418457 MPHOSPH8Q99549 860 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms