RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GPAMQ9HCL2 828 aa16.8■□□□□ 0.28
SSBP3-205ENST00000417664 EVLQ9UI08 416 aaPredicted RBP16.8■□□□□ 0.28
SSBP3-205ENST00000417664 ANKRD65E5RJM6 399 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 CCL22O00626 93 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 BUD23O43709 281 aaKnown RBP16.79■□□□□ 0.28
SSBP3-205ENST00000417664 DNAJC6O75061 913 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 ZNF821O75541 412 aaPredicted RBP16.79■□□□□ 0.28
SSBP3-205ENST00000417664 RBP1P09455 135 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 LTA4HP09960 611 aaKnown RBP16.79■□□□□ 0.28
SSBP3-205ENST00000417664 CEBPBP17676 345 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 SLC8A1P32418 973 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 ABL2P42684 1182 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 TTPAP49638 278 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 SUOXP51687 545 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 RAD51Q06609 339 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 ITGA9Q13797 1035 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 ACAP2Q15057 778 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 SHHQ15465 462 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 DUSP6Q16828 381 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 FUT11Q495W5 492 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 ZNF697Q5TEC3 545 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 LIPMQ5VYY2 423 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 CES4AQ5XG92 561 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 ZCCHC23Q6ZST2 131 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 NXNL1Q96CM4 212 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 CCDC126Q96EE4 140 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 OLFM1Q99784 485 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 WWP1Q9H0M0 922 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 SFXN1Q9H9B4 322 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 IL17CQ9P0M4 197 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 ZNF711Q9Y462 761 aa16.79■□□□□ 0.28
SSBP3-205ENST00000417664 A0A0J9YYE9 177 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 DNAJC8O75937 253 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 WISP3O95389 354 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 TRBC1P01850 177 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 CD9P21926 228 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 FDXRP22570 491 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 MAGEA9P43362 315 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 VASPP50552 380 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 ECT2LQ008S8 904 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 PTPRCAPQ14761 206 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 DGKKQ5KSL6 1271 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 LY6G5CQ5SRR4 150 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 C22orf39Q6P5X5 142 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 RBM23Q86U06 439 aaKnown RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 CAMK1DQ8IU85 385 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 AHI1Q8N157 1196 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 EFHBQ8N7U6 833 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 ZSWIM3Q96MP5 696 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 LYSMD1Q96S90 227 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 NDNQ99608 321 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 AARSD1Q9BTE6 412 aaKnown RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 TMEM120AQ9BXJ8 343 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 GPR63Q9BZJ6 419 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 COMMD10Q9Y6G5 202 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 MYO7AQ13402 2215 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 TK2O00142 265 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 NDUFS3O75489 264 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 POP4O95707 220 aaKnown RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 SERPINB5P36952 375 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 GMPRP36959 345 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 PPARGP37231 505 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 HK2P52789 917 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 ADARP55265 1226 aaKnown RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 ZNF460Q14592 562 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 MYLK3Q32MK0 819 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 LDB1Q86U70 411 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 STK40Q8N2I9 435 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 HEXDCQ8WVB3 486 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 PPM1EQ8WY54 764 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.78■□□□□ 0.281e-7■■■■■ 35.3
SSBP3-205ENST00000417664 ERP27Q96DN0 273 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 ZNF641Q96N77 438 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 TUBB6Q9BUF5 446 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 C20orf27Q9GZN8 174 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 CCDC68Q9H2F9 335 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 LINC00597Q9H2U6 94 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 IGSF5Q9NSI5 407 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 DZANK1Q9NVP4 752 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 POLR3BQ9NW08 1133 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 CPSF2Q9P2I0 782 aaKnown RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 XPR1Q9UBH6 696 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 FBXO10Q9UK96 956 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 CRYL1Q9Y2S2 319 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 YBX2Q9Y2T7 364 aaKnown RBP16.78■□□□□ 0.28
SSBP3-205ENST00000417664 PPIL1Q9Y3C6 166 aa16.78■□□□□ 0.28
SSBP3-205ENST00000417664 SBK3P0C264 359 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 MC4RP32245 332 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.28
SSBP3-205ENST00000417664 PTPN5P54829 565 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 DNAJB13P59910 316 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 DLG1Q12959 904 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 SEMA3AQ14563 771 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 CERS6Q6ZMG9 384 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 ADGRD2Q7Z7M1 963 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 LPGAT1Q92604 370 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 ECHDC3Q96DC8 303 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 MYLK2Q9H1R3 596 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 ZFYVE1Q9HBF4 777 aa16.77■□□□□ 0.28
SSBP3-205ENST00000417664 SYTL2Q9HCH5 934 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms