RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 CCBE1Q6UXH8 406 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 DNAJC14Q6Y2X3 702 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF517Q6ZMY9 492 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CMC1Q7Z7K0 106 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 STX12Q86Y82 276 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 FAM126BQ8IXS8 530 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 RTL3Q8N8U3 475 aaKnown RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 TEKT5Q96M29 485 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 PCDHB18PQ96TA0 734 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 GAD1Q99259 594 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CHCHD6Q9BRQ6 235 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 FGFBP2Q9BYJ0 223 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 MTMR12Q9C0I1 747 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 SLC7A5P2Q9GIP4 190 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 UNC93B1Q9H1C4 597 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 TTYH1Q9H313 450 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 TUT1Q9H6E5 874 aaKnown RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 KAT8Q9H7Z6 458 aaKnown RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CAB39LQ9H9S4 337 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 C17orf75Q9HAS0 396 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CASS4Q9NQ75 786 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 PDLIM7Q9NR12 457 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 RASSF1Q9NS23 344 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 PFDN2Q9UHV9 154 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 TRMT6Q9UJA5 497 aaKnown RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 ADAM30Q9UKF2 790 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 USP18Q9UMW8 372 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 ABCG2Q9UNQ0 655 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 PEX16Q9Y5Y5 336 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 MAGEB16A2A368 324 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF99A8MXY4 864 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 SUPT3HB4E1H0 165 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 TADA2AO75478 443 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 MTRF1O75570 445 aaKnown RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 SOAT2O75908 522 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 ALDH1A1P00352 501 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 GNRH1P01148 92 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 SLC15A1P46059 708 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 C1QBPQ07021 282 aaKnown RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 PPP3CAQ08209 521 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 SREBF2Q12772 1141 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CUL2Q13617 745 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 LSM12Q3MHD2 195 aaKnown RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 SGO1Q5FBB7 561 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 GRTP1Q5TC63 336 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 OGFRL1Q5TC84 451 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 ANKRD22Q5VYY1 191 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 SLC30A10Q6XR72 485 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 PLEKHG7Q6ZR37 379 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CADM2Q8N3J6 435 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CNTD1Q8N815 330 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 MCPH1Q8NEM0 835 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 OR6B3Q8NGW1 331 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 MCOLN3Q8TDD5 553 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 TFB1MQ8WVM0 346 aaKnown RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CENPIQ92674 756 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 FBXL20Q96IG2 436 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 FERD3LQ96RJ6 166 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 OMDQ99983 421 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 CEP41Q9BYV8 373 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 MAGEB5Q9BZ81 275 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 SAV1Q9H4B6 383 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-203ENST00000406072 DUSP12Q9UNI6 340 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 PLCL2Q9UPR0 1127 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 ATP8B3O60423 1300 aa5.87□□□□□ -1.47
HDAC9-203ENST00000406072 TYW5A2RUC4 315 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CCDC154A6NI56 674 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ASB14A6NK59 587 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 EFCAB9A8MZ26 197 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 APOC4-APOC2K7ER74 178 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 KMOO15229 486 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SSNA1O43805 119 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 TYROBPO43914 113 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 APOC2P02655 101 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 COL6A2P12110 1019 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 HNRNPLP14866 589 aaKnown RBP eCLIP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 GPD1P21695 349 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 FMO4P31512 558 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 HPCAL1P37235 193 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 TMBIM6P55061 237 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 LRRC74AQ0VAA2 488 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SQLEQ14534 574 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SURF1Q15526 300 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PHKG1Q16816 387 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 SYT16Q17RD7 645 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 RNASEH2BQ5TBB1 312 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 BORAQ6PGQ7 559 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF605Q86T29 641 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 BBS7Q8IWZ6 715 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF781Q8N8C0 355 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PIK3C3Q8NEB9 887 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 PPHLN1Q8NEY8 458 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 LRRC15Q8TF66 581 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 JPH3Q8WXH2 748 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 BRI3BPQ8WY22 251 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 CPT1BQ92523 772 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 NCSTNQ92542 709 aa5.86□□□□□ -1.47
HDAC9-203ENST00000406072 FAM120BQ96EK7 910 aaKnown RBP5.86□□□□□ -1.47
HDAC9-203ENST00000406072 EGFL8Q99944 293 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms