RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 APOC4-APOC2K7ER74 178 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 TPP1O14773 563 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 FZD6O60353 706 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 STK10O94804 968 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 TJP3O95049 919 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 TRBC1P01850 177 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 APOC2P02655 101 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 PDHA1P08559 390 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 SPINK2P20155 84 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 ATP5OP48047 213 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 HK3P52790 923 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 KIAA1024LP59773 190 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 E2F1Q01094 437 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 ZBTB17Q13105 803 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 EIF2B5Q13144 721 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 LLGL1Q15334 1064 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 RAET1GQ6H3X3 334 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 ESRP1Q6NXG1 681 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 ZCCHC8Q6NZY4 707 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 PNCKQ6P2M8 343 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 BBS12Q6ZW61 710 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 ZC3H18Q86VM9 953 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 GKN2Q86XP6 184 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 RAVER1Q8IY67 606 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 OR56A4Q8NGH8 313 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 COQ10AQ96MF6 247 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 NSMCE3Q96MG7 304 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 HEMGNQ9BXL5 484 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 LACRTQ9GZZ8 138 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 SLC25A51Q9H1U9 297 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 KLHL8Q9P2G9 620 aaPredicted RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 MOSPD1Q9UJG1 213 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 REXO2Q9Y3B8 237 aaKnown RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 LAMA1P25391 3075 aa15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 COL5A1P20908 1838 aaPredicted RBP15.78■□□□□ 0.12
TSPAN4-201ENST00000346501 K7ESM1 405 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 TRIM38O00635 465 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 TNFRSF10CO14798 259 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 ARHGAP6O43182 974 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 HOXC4P09017 264 aaPredicted RBP15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 GPR1P46091 355 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 SRP54P61011 504 aaKnown RBP15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 NIPAL4Q0D2K0 466 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 DNAJC3Q13217 504 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 XRCC4Q13426 336 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 LRRC66Q68CR7 880 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 PID1Q7Z2X4 250 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 TMPRSS12Q86WS5 348 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 TMEM139Q8IV31 216 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 RNF10Q8N5U6 811 aaKnown RBP15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 KRT35Q92764 455 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 LRRC45Q96CN5 670 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 DTD2Q96FN9 168 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 CNTNAP3BQ96NU0 1288 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 RBM15Q96T37 977 aaKnown RBP eCLIP15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 DESI2Q9BSY9 194 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 CEP41Q9BYV8 373 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 CNTNAP3Q9BZ76 1288 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 OSBPL8Q9BZF1 889 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 ABCG4Q9H172 646 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 GLOD4Q9HC38 313 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 PKD2L2Q9NZM6 624 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 SAE1Q9UBE0 346 aaPredicted RBP15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 SALL4Q9UJQ4 1053 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 TRHDEQ9UKU6 1024 aa15.77■□□□□ 0.12
TSPAN4-201ENST00000346501 TDRD6O60522 2096 aaKnown RBP15.77■□□□□ 0.11
TSPAN4-201ENST00000346501 C1orf232A0A0U1RR37 186 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 TMEM8BA6NDV4 472 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 ANKRD66B4E2M5 251 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 LMO7DNF2Z398 122 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 JUPP14923 745 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 LHCGRP22888 699 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 ACP1P24666 158 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 TRIM23P36406 574 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 ETV3P41162 512 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 MARCKSL1P49006 195 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 ACADVLP49748 655 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 SKOR1P84550 965 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 PEX6Q13608 980 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 PRKD1Q15139 912 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 SLC14A2Q15849 920 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 PCSK7Q16549 785 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 DEFB133Q30KQ1 61 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 PROX2Q3B8N5 592 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 LVRNQ6Q4G3 990 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 CRTC1Q6UUV9 634 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 DHRS13Q6UX07 377 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 Q6ZVL8 140 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 TMPRSS7Q7RTY8 843 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 HSD11B1LQ7Z5J1 315 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 CDKL3Q8IVW4 592 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 NRSN1Q8IZ57 195 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 RBFAQ8N0V3 343 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 CNTD1Q8N815 330 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 FAM181AQ8N9Y4 354 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 TTC13Q8NBP0 860 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 PLA2G15Q8NCC3 412 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 HTR3CQ8WXA8 447 aa15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 TSACCQ96A04 125 aaPredicted RBP15.76■□□□□ 0.11
TSPAN4-201ENST00000346501 AP2M1Q96CW1 435 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms