RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 KRCC1Q9NPI7 259 aaPredicted RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 XPR1Q9UBH6 696 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 TRPC4Q9UBN4 977 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SIPA1L3O60292 1781 aaPredicted RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 GJA1P17302 382 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 OGNP20774 298 aaKnown RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 BLKP51451 505 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SEMA5AQ13591 1074 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 MSANTD2Q6P1R3 559 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 BRAT1Q6PJG6 821 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 HFE2Q6ZVN8 426 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SLC44A2Q8IWA5 706 aaPredicted RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 TEX9Q8N6V9 391 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 DCAF4L2Q8NA75 395 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 OR2AP1Q8NGE2 309 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 LMO3Q8TAP4 145 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 PHOSPHO2Q8TCD6 241 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SLC44A1Q8WWI5 657 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 INPP5DQ92835 1189 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 STRA6Q9BX79 667 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SUV39H2Q9H5I1 410 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CCDC134Q9H6E4 229 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 LRRC4CQ9HCJ2 640 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 KCNK4Q9NYG8 393 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 TCRBV7S2A1N4TA0A589 114 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 ZNF487B1APH4 448 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 PTGESO14684 152 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 ESR1P03372 595 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 AKT2P31751 481 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 KCNQ1P51787 676 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 PLIN5Q00G26 463 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 FASTKQ14296 549 aaKnown RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 TEAD2Q15562 447 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 TAF1AQ15573 450 aaPredicted RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SH3PXD2AQ5TCZ1 1133 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 LIPMQ5VYY2 423 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 MTDHQ86UE4 582 aaKnown RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CYP4Z1Q86W10 505 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 COLGALT2Q8IYK4 626 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 KYQ8NBH2 561 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 OR52K2Q8NGK3 314 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 ZFP28Q8NHY6 868 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 RERGQ96A58 199 aaPredicted RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CNDP1Q96KN2 507 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 FERD3LQ96RJ6 166 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CHRAC1Q9NRG0 131 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 HS3ST4Q9Y661 456 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 PIPSLA2A3N6 862 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 ADAMTS4O75173 837 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CYP11A1P05108 521 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 C2P06681 752 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 PTGER3P43115 390 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 RAB33AQ14088 237 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 GPR33Q49SQ1 333 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 PLEKHG4Q58EX7 1191 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SNX30Q5VWJ9 437 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CAPN13Q6MZZ7 669 aaPredicted RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CCDC90BQ9GZT6 254 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 TMCC3Q9ULS5 477 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 C16orf96A6NNT2 1141 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 FPGTO14772 594 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 MT-CYBP00156 380 aaPredicted RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 VIPP01282 170 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 CTSAP10619 480 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 RFX3P48380 749 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 ZNF132P52740 706 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 RGS1Q08116 209 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 FUT11Q495W5 492 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 EOGTQ5NDL2 527 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 KIAA0930Q6ICG6 404 aaPredicted RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 ZCCHC8Q6NZY4 707 aaKnown RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 GPRIN3Q6ZVF9 776 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 UBE2R2Q712K3 238 aaPredicted RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 LPCAT2Q7L5N7 544 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 RPAINQ86UA6 219 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 CENPLQ8N0S6 344 aaPredicted RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 ZNF614Q8N883 585 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 TSTD1Q8NFU3 115 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 CKAP2Q8WWK9 683 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 VPS33AQ96AX1 596 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 VPS50Q96JG6 964 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 WARS2Q9UGM6 360 aaKnown RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 GGA2Q9UJY4 613 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 COLEC10Q9Y6Z7 277 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 VGLL3A8MV65 326 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 MAP2K7O14733 419 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 TARSP26639 723 aaKnown RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 NTSP30990 170 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 NME5P56597 212 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 ITPRIPL2Q3MIP1 535 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 C17orf64Q86WR6 236 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 RXFP1Q9HBX9 757 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 KLC4Q9NSK0 619 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 IMP3Q9NV31 184 aaKnown RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 H2AFY2Q9P0M6 372 aaPredicted RBP11.22□□□□□ -0.61
POLR1B-202ENST00000333990 RAP2CQ9Y3L5 183 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 TAF1P21675 1872 aa11.22□□□□□ -0.61
POLR1B-202ENST00000333990 BANF1O75531 89 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms