RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 WISP3O95389 354 aaPredicted RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 HSPA4LO95757 839 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 LTA4HP09960 611 aaKnown RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 PRSS56P0CW18 603 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 CCDC166P0CW27 439 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 TARSP26639 723 aaKnown RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 HLA-FP30511 346 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 MAPK8P45983 427 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 GRIA4P48058 902 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 ZNF697Q5TEC3 545 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 GRASPQ7Z6J2 395 aaPredicted RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 MYO19Q96H55 970 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 POLR3BQ9NW08 1133 aaPredicted RBP21.27■■□□□ 1
ATG4D-201ENST00000309469 TRIM33Q9UPN9 1127 aa21.27■■□□□ 1
ATG4D-201ENST00000309469 GRXCR1A8MXD5 290 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 STX7O15400 261 aaKnown RBP21.26■□□□□ 0.99
ATG4D-201ENST00000309469 ZNF821O75541 412 aaPredicted RBP21.26■□□□□ 0.99
ATG4D-201ENST00000309469 PRAMEF12O95522 483 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 PENKP01210 267 aaPredicted RBP21.26■□□□□ 0.99
ATG4D-201ENST00000309469 FDXRP22570 491 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 SLC26A3P40879 764 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 BCL2L1Q07817 233 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 ALYREFQ86V81 257 aaKnown RBP21.26■□□□□ 0.99
ATG4D-201ENST00000309469 SPNS2Q8IVW8 549 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 ANKRD49Q8WVL7 239 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 PIH1D2Q8WWB5 315 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 TCF12Q99081 682 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 MAGEE1Q9HCI5 957 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 HAO1Q9UJM8 370 aa21.26■□□□□ 0.99
ATG4D-201ENST00000309469 MTCL1Q9Y4B5 1905 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 FCHO1O14526 889 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 DGKKQ5KSL6 1271 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 KLC3Q6P597 504 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 CYB5D1Q6P9G0 228 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 TMEM207Q6UWW9 146 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 IRF7Q92985 503 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 RPL10LQ96L21 214 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 ZSWIM3Q96MP5 696 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 EBF4Q9BQW3 602 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 DRC3Q9H069 523 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 TNKS2Q9H2K2 1166 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 FAM96AQ9H5X1 160 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 ARHGEF3Q9NR81 526 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 ZDHHC7Q9NXF8 308 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 FKBPLQ9UIM3 349 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 LAMA2P24043 3122 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 NEDD8-MDP1E9PL57 170 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 TRAFD1O14545 582 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 CBX6O95503 412 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 IGSF6O95976 241 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 ATP5BP06576 529 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 CA3P07451 260 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 CTSOP43234 321 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 NAGLUP54802 743 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 RPL26P61254 145 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 ACAP2Q15057 778 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 ZNF77Q15935 545 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 TECRLQ5HYJ1 363 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 PDE12Q6L8Q7 609 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 PIM3Q86V86 326 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 PRR11Q96HE9 360 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 RILPQ96NA2 401 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 AARSD1Q9BTE6 412 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 BBS2Q9BXC9 721 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 LINC00597Q9H2U6 94 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 STN1Q9H668 368 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 BPIFA1Q9NP55 256 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 KLC4Q9NSK0 619 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 TBC1D14Q9P2M4 693 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 DPP7Q9UHL4 492 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 RPL26L1Q9UNX3 145 aaKnown RBP21.25■□□□□ 0.99
ATG4D-201ENST00000309469 ZNF711Q9Y462 761 aa21.25■□□□□ 0.99
ATG4D-201ENST00000309469 HTRA2O43464 458 aaPredicted RBP21.24■□□□□ 0.99
ATG4D-201ENST00000309469 PIGNO95427 931 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 RBP1P09455 135 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 SRCP12931 536 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 NQO1P15559 274 aaKnown RBP21.24■□□□□ 0.99
ATG4D-201ENST00000309469 ALOX15P16050 662 aaPredicted RBP21.24■□□□□ 0.99
ATG4D-201ENST00000309469 CTPS1P17812 591 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 MC4RP32245 332 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 SUOXP51687 545 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 KCNJ2P63252 427 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 TIAL1Q01085 375 aaKnown RBP eCLIP21.24■□□□□ 0.99
ATG4D-201ENST00000309469 ASPHQ12797 758 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 FUT11Q495W5 492 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 ASTLQ6HA08 431 aaPredicted RBP21.24■□□□□ 0.99
ATG4D-201ENST00000309469 KIF2BQ8N4N8 673 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 ZNF781Q8N8C0 355 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 LPGAT1Q92604 370 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 ZNF707Q96C28 371 aaPredicted RBP21.24■□□□□ 0.99
ATG4D-201ENST00000309469 SGF29Q96ES7 293 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 TUBB6Q9BUF5 446 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 NMUR2Q9GZQ4 415 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 POPDC3Q9HBV1 291 aa21.24■□□□□ 0.99
ATG4D-201ENST00000309469 A0A0U1RQS6 177 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 H7C0S8 307 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ZNF195O14628 629 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 ZNF197O14709 1029 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 SOCS5O75159 536 aa21.23■□□□□ 0.99
ATG4D-201ENST00000309469 NDUFS3O75489 264 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms