RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 STX3Q13277 289 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 UBAP2LQ14157 1087 aaKnown RBP10.56□□□□□ -0.72
VPS11-208ENST00000621676 TMC8Q8IU68 726 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 FSTL5Q8N475 847 aaPredicted RBP10.56□□□□□ -0.72
VPS11-208ENST00000621676 SIDT2Q8NBJ9 832 aaKnown RBP10.56□□□□□ -0.72
VPS11-208ENST00000621676 CHFRQ96EP1 664 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 SLC30A3Q99726 388 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 PLLPQ9Y342 182 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 ANKRD66B4E2M5 251 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 LATO43561 262 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 PARNO95453 639 aaKnown RBP10.56□□□□□ -0.72
VPS11-208ENST00000621676 GSTA1P08263 222 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 GSTA2P09210 222 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 STMN1P16949 149 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 ALDH3A1P30838 453 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 ARRB2P32121 409 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 CCNHP51946 323 aaPredicted RBP10.56□□□□□ -0.72
VPS11-208ENST00000621676 HSPA14Q0VDF9 509 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 DLG1Q12959 904 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 PFKFB4Q16877 469 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 CLEC6AQ6EIG7 209 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 LILRA6Q6PI73 481 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 DOK6Q6PKX4 331 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 KDELC1Q6UW63 502 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 VN1R2Q8NFZ6 395 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 FUBP1Q96AE4 644 aaKnown RBP10.56□□□□□ -0.72
VPS11-208ENST00000621676 CDK15Q96Q40 435 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 ASB8Q9H765 288 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 LATS2Q9NRM7 1088 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 MBD1Q9UIS9 605 aaPredicted RBP10.56□□□□□ -0.72
VPS11-208ENST00000621676 SOX13Q9UN79 622 aa10.56□□□□□ -0.72
VPS11-208ENST00000621676 RIF1Q5UIP0 2472 aaKnown RBP10.56□□□□□ -0.72
VPS11-208ENST00000621676 FAM92AA1XBS5 289 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 A6NNZ2 444 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 CD3EAPO15446 510 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 C1QAP02745 245 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 ASGR2P07307 311 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 ABHD2P08910 425 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 CPA3P15088 417 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 AKT1P31749 480 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 NDST2P52849 883 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 AIF1P55008 147 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 PARP15Q460N3 678 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 FUT11Q495W5 492 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 TAF1BQ53T94 588 aaPredicted RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 TSTD2Q5T7W7 516 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 LINC00523Q86TU6 105 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 TMEM135Q86UB9 458 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 ZC3HC1Q86WB0 502 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 HEXDCQ8WVB3 486 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 EID2BQ96D98 161 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 CDKN2AIPNLQ96HQ2 116 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 TACO1Q9BSH4 297 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 C2orf49Q9BVC5 232 aaPredicted RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 HERC2P3Q9BVR0 1158 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 HACD3Q9P035 362 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 USP15Q9Y4E8 981 aaPredicted RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 FREM2Q5SZK8 3169 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 WDFY3Q8IZQ1 3526 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 CLGNO14967 610 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 SUN1O94901 812 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 PRLP01236 227 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 PRKCHP24723 683 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 MPSTP25325 297 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 GDF5P43026 501 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 KCNJ2P63252 427 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 PDAP1Q13442 181 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 BOP1Q14137 746 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 FAM78AQ5JUQ0 283 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 ARTNQ5T4W7 220 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 IER5LQ5T953 404 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 LAYNQ6UX15 382 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 MBOAT1Q6ZNC8 495 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 Q6ZVL8 140 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 MMAAQ8IVH4 418 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 ADGRG2Q8IZP9 1017 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 HJURPQ8NCD3 748 aaPredicted RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 MZB1Q8WU39 189 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 NUDT8Q8WV74 236 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 NXPE3Q969Y0 559 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 CCDC124Q96CT7 223 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 NRTNQ99748 197 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 TTLL2Q9BWV7 592 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 NMRAL1Q9HBL8 299 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 EURLQ9NYK6 297 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 ACOT9Q9Y305 439 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 SHOX2O60902 331 aaPredicted RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 LILRB3O75022 631 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 JUNP05412 331 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 ATXN1LP0C7T5 689 aaKnown RBP10.55□□□□□ -0.72
VPS11-208ENST00000621676 GFAPP14136 432 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 GGT5P36269 586 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 CD151P48509 253 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 GRIN2CQ14957 1233 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 ARHGAP15Q53QZ3 475 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 PITRM1Q5JRX3 1037 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 RETSATQ6NUM9 610 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 PAQR3Q6TCH7 311 aa10.55□□□□□ -0.72
VPS11-208ENST00000621676 CHPFQ8IZ52 775 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms