RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 CR2P20023 1033 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 DYNLT1P63172 113 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 SEMG2Q02383 582 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 ELOCQ15369 112 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 WSCD2Q2TBF2 565 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 DENND2CQ68D51 928 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 ENPP7Q6UWV6 458 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 TMPRSS12Q86WS5 348 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 PHACTR4Q8IZ21 702 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 PGBD5Q8N414 524 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 FSTL5Q8N475 847 aaPredicted RBP14.19□□□□□ -0.14
LIG1-218ENST00000599322 PQLC3Q8N755 202 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 ZCCHC14Q8WYQ9 949 aaKnown RBP14.19□□□□□ -0.14
LIG1-218ENST00000599322 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 SCRN2Q96FV2 425 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 TBATAQ96M53 351 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 BAG1Q99933 345 aaPredicted RBP14.19□□□□□ -0.14
LIG1-218ENST00000599322 APOOQ9BUR5 198 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 ADGRE3Q9BY15 652 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 ABCG4Q9H172 646 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 MBNL1Q9NR56 388 aaKnown RBP14.19□□□□□ -0.14
LIG1-218ENST00000599322 GPR27Q9NS67 375 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 DTLQ9NZJ0 730 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 SEPT10Q9P0V9 454 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 B4GALT6Q9UBX8 382 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 KLQ9UEF7 1012 aa14.19□□□□□ -0.14
LIG1-218ENST00000599322 FAM221BA6H8Z2 402 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 GOLGA6CA6NDK9 693 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 GOLGA6BA6NDN3 693 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 PSMD11O00231 422 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 TPP1O14773 563 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 MTSS1O43312 755 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 SIGLEC6O43699 453 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 PTMAP06454 111 aaKnown RBP14.18□□□□□ -0.14
LIG1-218ENST00000599322 GOLGA6DP0CG33 693 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 RPL26P61254 145 aaKnown RBP14.18□□□□□ -0.14
LIG1-218ENST00000599322 PPIDQ08752 370 aaKnown RBP14.18□□□□□ -0.14
LIG1-218ENST00000599322 TRAF2Q12933 501 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 DNAJC3Q13217 504 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 NFATC4Q14934 902 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 PRRT3Q5FWE3 981 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 KAZNQ674X7 775 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 SLC9A4Q6AI14 798 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 C11orf63Q6NUN7 778 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 ESRP1Q6NXG1 681 aaKnown RBP14.18□□□□□ -0.14
LIG1-218ENST00000599322 ZCCHC8Q6NZY4 707 aaKnown RBP14.18□□□□□ -0.14
LIG1-218ENST00000599322 DHRS13Q6UX07 377 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 TMPRSS7Q7RTY8 843 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 RD3Q7Z3Z2 195 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 ZSWIM9Q86XI8 627 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 HID1Q8IV36 788 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 SDR16C5Q8N3Y7 309 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 SLC25A45Q8N413 288 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 ZNF548Q8NEK5 533 aaPredicted RBP14.18□□□□□ -0.14
LIG1-218ENST00000599322 P3H4Q92791 437 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 VOPP1Q96AW1 172 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 NUS1Q96E22 293 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 WDR92Q96MX6 357 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 PHPT1Q9NRX4 125 aaPredicted RBP14.18□□□□□ -0.14
LIG1-218ENST00000599322 GOLGA6AQ9NYA3 693 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 MOSPD1Q9UJG1 213 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 RPL26L1Q9UNX3 145 aaKnown RBP14.18□□□□□ -0.14
LIG1-218ENST00000599322 HYOU1Q9Y4L1 999 aa14.18□□□□□ -0.14
LIG1-218ENST00000599322 SOWAHDA6NJG2 315 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 KCNK1O00180 336 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 HEXIM1O94992 359 aaKnown RBP14.17□□□□□ -0.14
LIG1-218ENST00000599322 CAPNS1P04632 268 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 PYGLP06737 847 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 HOXB3P14651 431 aaPredicted RBP14.17□□□□□ -0.14
LIG1-218ENST00000599322 TSHRP16473 764 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 ZNF30P17039 623 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 TGM2P21980 687 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 ACP1P24666 158 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 CTNNA2P26232 953 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 DSC2Q02487 901 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 KIF5AQ12840 1032 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 RALGDSQ12967 914 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 TFDP3Q5H9I0 405 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 MFSD7Q6UXD7 560 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 KANSL1Q7Z3B3 1105 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 GKN2Q86XP6 184 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 KATNAL2Q8IYT4 538 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 PLD5Q8N7P1 536 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 KIAA1524Q8TCG1 905 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 CCHCR1Q8TD31 782 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 TFB1MQ8WVM0 346 aaKnown RBP14.17□□□□□ -0.14
LIG1-218ENST00000599322 LGMNQ99538 433 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 WDR26Q9H7D7 661 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 PCDH9Q9HC56 1237 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 UCKL1Q9NWZ5 548 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 SALL4Q9UJQ4 1053 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 OR1A2Q9Y585 309 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 NBEAQ8NFP9 2946 aa14.17□□□□□ -0.14
LIG1-218ENST00000599322 DSPP15924 2871 aaKnown RBP14.16□□□□□ -0.14
LIG1-218ENST00000599322 ZFYVE26Q68DK2 2539 aa14.16□□□□□ -0.14
LIG1-218ENST00000599322 CACNA1GO43497 2377 aa14.16□□□□□ -0.14
LIG1-218ENST00000599322 K7ESM1 405 aa14.16□□□□□ -0.14
LIG1-218ENST00000599322 TAF4O00268 1085 aa14.16□□□□□ -0.14
LIG1-218ENST00000599322 TRIM38O00635 465 aa14.16□□□□□ -0.14
LIG1-218ENST00000599322 NRDCO43847 1150 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms