RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 MT-CO3P00414 261 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 ANXA6P08133 673 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 PDHA1P08559 390 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 CTPS1P17812 591 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 LHCGRP22888 699 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 CCNCP24863 283 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 ARHGAP25P42331 645 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 BLKP51451 505 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 KIAA1024LP59773 190 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 SRP54P61011 504 aaKnown RBP13.91□□□□□ -0.18
APOC1-208ENST00000592535 DSC2Q02487 901 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 IHHQ14623 411 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 C6orf132Q5T0Z8 1188 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 ARMC12Q5T9G4 340 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 DENND2CQ68D51 928 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 GUSBP11Q6P575 273 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 SLC35F3Q8IY50 421 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.91□□□□□ -0.18
APOC1-208ENST00000592535 DCBLD1Q8N8Z6 715 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 TC2NQ8N9U0 490 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 IFI44Q8TCB0 444 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 PIH1D2Q8WWB5 315 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 FUBP1Q96AE4 644 aaKnown RBP13.91□□□□□ -0.18
APOC1-208ENST00000592535 NUS1Q96E22 293 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 PDXPQ96GD0 296 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 WDR92Q96MX6 357 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 BOCQ9BWV1 1114 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 POLR1EQ9GZS1 481 aaKnown RBP13.91□□□□□ -0.18
APOC1-208ENST00000592535 RBM22Q9NW64 420 aaKnown RBP eCLIP13.91□□□□□ -0.18
APOC1-208ENST00000592535 DTLQ9NZJ0 730 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 RAXQ9Y2V3 346 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 RAI2Q9Y5P3 530 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 APC2O95996 2303 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 ACACAQ13085 2346 aa13.91□□□□□ -0.18
APOC1-208ENST00000592535 ADAMTS20P59510 1910 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 A0A0U1RQS6 177 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 EME2A4GXA9 379 aaPredicted RBP13.9□□□□□ -0.18
APOC1-208ENST00000592535 TMEM202A6NGA9 273 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 C3orf70A6NLC5 250 aaPredicted RBP13.9□□□□□ -0.18
APOC1-208ENST00000592535 CACNB4O00305 520 aaPredicted RBP13.9□□□□□ -0.18
APOC1-208ENST00000592535 FZD6O60353 706 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 HLA-DQB2P05538 268 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 GP1BAP07359 652 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 ALPIP09923 528 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 CYP2A6P11509 494 aaPredicted RBP13.9□□□□□ -0.18
APOC1-208ENST00000592535 CTSEP14091 401 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 MX2P20592 715 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 ELOCQ15369 112 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 NR0B2Q15466 257 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 CDCP2Q5VXM1 449 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 ALG1LQ6GMV1 187 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 ESRP1Q6NXG1 681 aaKnown RBP13.9□□□□□ -0.18
APOC1-208ENST00000592535 PNCKQ6P2M8 343 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 EFL1Q7Z2Z2 1120 aaKnown RBP13.9□□□□□ -0.18
APOC1-208ENST00000592535 HSD11B1LQ7Z5J1 315 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 TSPAN33Q86UF1 283 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 CACTIN-AS1Q8N1I8 211 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 FSTL5Q8N475 847 aaPredicted RBP13.9□□□□□ -0.18
APOC1-208ENST00000592535 PLD5Q8N7P1 536 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 ATL2Q8NHH9 583 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 OR1E3Q8WZA6 343 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 FATE1Q969F0 183 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 HDAC11Q96DB2 347 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 NXPE2Q96DL1 559 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 SCRN2Q96FV2 425 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 SMIM14Q96QK8 99 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 MCCC1Q96RQ3 725 aaPredicted RBP13.9□□□□□ -0.18
APOC1-208ENST00000592535 LGR4Q9BXB1 951 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 FGF22Q9HCT0 170 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 INTUQ9ULD6 942 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 PPIL1Q9Y3C6 166 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 HYOU1Q9Y4L1 999 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 TTLL3Q9Y4R7 772 aa13.9□□□□□ -0.18
APOC1-208ENST00000592535 TNFP01375 233 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 KRT1P04264 644 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 TNNT1P13805 278 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 CCNB1P14635 433 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 NFKBIAP25963 317 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 TRIM23P36406 574 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 ETV3P41162 512 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 NIPAL4Q0D2K0 466 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 ARHGEF7Q14155 803 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 TCEAL1Q15170 157 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 PERM1Q5SV97 790 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 SLC9A4Q6AI14 798 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 CRTC1Q6UUV9 634 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 USP45Q70EL2 814 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 CCDC13Q8IYE1 715 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 CBARPQ8N350 705 aaPredicted RBP13.89□□□□□ -0.19
APOC1-208ENST00000592535 CCNYQ8ND76 341 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 OR56A4Q8NGH8 313 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 ARRDC2Q8TBH0 407 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 MAPK15Q8TD08 544 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.89□□□□□ -0.19
APOC1-208ENST00000592535 RNF25Q96BH1 459 aaPredicted RBP13.89□□□□□ -0.19
APOC1-208ENST00000592535 DTD2Q96FN9 168 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
APOC1-208ENST00000592535 LGMNQ99538 433 aa13.89□□□□□ -0.19
APOC1-208ENST00000592535 TDRD1Q9BXT4 1180 aaKnown RBP13.89□□□□□ -0.19
APOC1-208ENST00000592535 NRSN2Q9GZP1 204 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms