RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 MAXP61244 160 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 SNRPD1P62314 119 aaKnown RBP11.75□□□□□ -0.53
TOMM40-204ENST00000589253 IFI35P80217 286 aaPredicted RBP11.75□□□□□ -0.53
TOMM40-204ENST00000589253 RFTN1Q14699 578 aaPredicted RBP11.75□□□□□ -0.53
TOMM40-204ENST00000589253 PDK1Q15118 436 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 PROX2Q3B8N5 592 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 POM121L1PQ3SYA9 428 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 SETMARQ53H47 684 aaPredicted RBP11.75□□□□□ -0.53
TOMM40-204ENST00000589253 ZC3H18Q86VM9 953 aaKnown RBP11.75□□□□□ -0.53
TOMM40-204ENST00000589253 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 FAM181AQ8N9Y4 354 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 GRIN3AQ8TCU5 1115 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 COG1Q8WTW3 980 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 UBE2Q2Q8WVN8 375 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 P3H4Q92791 437 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 ARRDC3Q96B67 414 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 GDAP1L1Q96MZ0 367 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 PSKH2Q96QS6 385 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 IL12RB2Q99665 862 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 CINPQ9BW66 212 aaPredicted RBP11.75□□□□□ -0.53
TOMM40-204ENST00000589253 CEP41Q9BYV8 373 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 DPH1Q9BZG8 443 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 ABCG4Q9H172 646 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 ZDHHC6Q9H6R6 413 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 CPNE5Q9HCH3 593 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 THSD1Q9NS62 852 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 HECAQ9UBI9 543 aaPredicted RBP11.75□□□□□ -0.53
TOMM40-204ENST00000589253 SEPT3Q9UH03 358 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 PPM1HQ9ULR3 514 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 ZNF462Q96JM2 2506 aa11.75□□□□□ -0.53
TOMM40-204ENST00000589253 B8ZZF3 427 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 PPP1R12AO14974 1030 aaPredicted RBP11.74□□□□□ -0.53
TOMM40-204ENST00000589253 KLK10O43240 276 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 SLC7A4O43246 635 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 LATO43561 262 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 SIGLEC6O43699 453 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 TJP3O95049 919 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 PIGNO95427 931 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 IGSF6O95976 241 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 MPOP05164 745 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 C6P13671 934 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 PTPN3P26045 913 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 MAT2AP31153 395 aaKnown RBP11.74□□□□□ -0.53
TOMM40-204ENST00000589253 MMP13P45452 471 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 ERVPABLB-1P60509 514 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 GNG11P61952 73 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 PPP2CBP62714 309 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 PPP2CAP67775 309 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 AP1B1Q10567 949 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 WASHC5Q12768 1159 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 ZNF235Q14590 738 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 ARSIQ5FYB1 569 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 FAM46CQ5VWP2 391 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 ALG1LQ6GMV1 187 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 TIGD7Q6NT04 549 aaPredicted RBP11.74□□□□□ -0.53
TOMM40-204ENST00000589253 PCSK4Q6UW60 755 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.74□□□□□ -0.53
TOMM40-204ENST00000589253 RASGEF1CQ8N431 466 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 CNTD1Q8N815 330 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 CCNYQ8ND76 341 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 TFB1MQ8WVM0 346 aaKnown RBP11.74□□□□□ -0.53
TOMM40-204ENST00000589253 ATG4AQ8WYN0 398 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 FAM131CQ96AQ9 280 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 OSBPL9Q96SU4 736 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 HEPHQ9BQS7 1158 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 NT5MQ9NPB1 228 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 SMARCAL1Q9NZC9 954 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 IL36AQ9UHA7 158 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 ZKSCAN5Q9Y2L8 839 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 PCDHB1Q9Y5F3 818 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 CFAP46Q8IYW2 2715 aa11.74□□□□□ -0.53
TOMM40-204ENST00000589253 C10orf142B7Z368 130 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 C1QTNF3-AMACRE9PGA6 284 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 PRAMEF26H0Y7S4 382 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 ZNF185O15231 689 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 FFAR2O15552 330 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 SLC28A2O43868 658 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 CEP104O60308 925 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 USP12O75317 370 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 JCHAINP01591 159 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 CCNB1P14635 433 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 RBL1P28749 1068 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 CD68P34810 354 aaPredicted RBP11.73□□□□□ -0.53
TOMM40-204ENST00000589253 CETN2P41208 172 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 RECQLP46063 649 aaPredicted RBP11.73□□□□□ -0.53
TOMM40-204ENST00000589253 DUSP3P51452 185 aaPredicted RBP11.73□□□□□ -0.53
TOMM40-204ENST00000589253 EIF3EP60228 445 aaKnown RBP11.73□□□□□ -0.53
TOMM40-204ENST00000589253 DSC2Q02487 901 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 VAC14Q08AM6 782 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 NIPAL4Q0D2K0 466 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 ATMQ13315 3056 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 XRCC4Q13426 336 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 LY6DQ14210 128 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 MYLK3Q32MK0 819 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 PIP5KL1Q5T9C9 394 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 MARC1Q5VT66 337 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 AGBL4Q5VU57 503 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
TOMM40-204ENST00000589253 KANSL1Q7Z3B3 1105 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms