RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 STON1Q9Y6Q2 735 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 WASF2Q9Y6W5 498 aa11.15□□□□□ -0.62
SF3B3-205ENST00000564899 MYO18AQ92614 2054 aaKnown RBP11.15□□□□□ -0.63
SF3B3-205ENST00000564899 MUC22E2RYF6 1773 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 MAN2B1O00754 1011 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 TRAFD1O14545 582 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 TTC4O95801 387 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 UGT2B4P06133 528 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 PDHA1P08559 390 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 TSHRP16473 764 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 TIE1P35590 1138 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 WASP42768 502 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 MAGEA9P43362 315 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 KIR2DL1P43626 348 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 RPL26P61254 145 aaKnown RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 SEPT6Q14141 434 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 ELAVL3Q14576 367 aaKnown RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 POU6F1Q14863 301 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 SF3A2Q15428 464 aaKnown RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 QPCTQ16769 361 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 PCID2Q5JVF3 399 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 UBAP2Q5T6F2 1119 aaKnown RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 LAIR1Q6GTX8 287 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 GDPD4Q6W3E5 623 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 Q6ZS52 159 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 HDXQ7Z353 690 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 CCNJLQ8IV13 435 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 STK40Q8N2I9 435 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 OR8D1Q8WZ84 308 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 VOPP1Q96AW1 172 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 ZNF641Q96N77 438 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 KLHL32Q96NJ5 620 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 NAT9Q9BTE0 207 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 OSBPL1AQ9BXW6 950 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 EPB41L4BQ9H329 900 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 SMOC1Q9H4F8 434 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 SUV39H2Q9H5I1 410 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 RPL26L1Q9UNX3 145 aaKnown RBP11.14□□□□□ -0.63
SF3B3-205ENST00000564899 TCAF1Q9Y4C2 921 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 CELSR3Q9NYQ7 3312 aa11.14□□□□□ -0.63
SF3B3-205ENST00000564899 A0A1W2PQ67 120 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 MAGEB16A2A368 324 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 HEATR9A2RTY3 570 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 K7ESF4 209 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 SPAG6O75602 509 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 LEFTY1O75610 366 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 PRNPP04156 253 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 PRKCGP05129 697 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 CTSLP07711 333 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 RETP07949 1114 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 ABHD2P08910 425 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 ADRA1DP25100 572 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 PHBP35232 272 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 GRIA4P48058 902 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 GPX6P59796 221 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 ENPP2Q13822 863 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 C2orf27AQ580R0 203 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 ARSIQ5FYB1 569 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 C9orf64Q5T6V5 341 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 SDE2Q6IQ49 451 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 UNC5AQ6ZN44 842 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 TRMT11Q7Z4G4 463 aaKnown RBP11.13□□□□□ -0.63
SF3B3-205ENST00000564899 DSG4Q86SJ6 1040 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 ZSWIM9Q86XI8 627 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 UHMK1Q8TAS1 419 aaKnown RBP11.13□□□□□ -0.63
SF3B3-205ENST00000564899 BLOC1S5Q8TDH9 187 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
SF3B3-205ENST00000564899 PIH1D2Q8WWB5 315 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 ECHDC3Q96DC8 303 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 RANBP9Q96S59 729 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 TRIM56Q9BRZ2 755 aaKnown RBP11.13□□□□□ -0.63
SF3B3-205ENST00000564899 LMAN1LQ9HAT1 526 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 MRM3Q9HC36 420 aaKnown RBP11.13□□□□□ -0.63
SF3B3-205ENST00000564899 LRRC4CQ9HCJ2 640 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 PRSS16Q9NQE7 514 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 ZNF446Q9NWS9 450 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 SOX13Q9UN79 622 aa11.13□□□□□ -0.63
SF3B3-205ENST00000564899 SETXQ7Z333 2677 aaKnown RBP11.13□□□□□ -0.63
SF3B3-205ENST00000564899 A0A087WUV0 522 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 CCDC78A2IDD5 438 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 C1QTNF3-AMACRE9PGA6 284 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 KPNA3O00505 521 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 TM4SF5O14894 197 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 SYNCRIPO60506 623 aaKnown RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 RNF40O75150 1001 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 USP1O94782 785 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 KLF8O95600 359 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 POLBP06746 335 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 GSTA2P09210 222 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 PIRTP0C851 137 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 CHRM1P11229 460 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-205ENST00000564899 CHRNB1P11230 501 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 CTPS1P17812 591 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 SSTR1P30872 391 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 NTSR1P30989 418 aa11.12□□□□□ -0.63
SF3B3-205ENST00000564899 SLC8A1P32418 973 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms