RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SLPIP03973 132 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 PSMA2P25787 234 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 MSNP26038 577 aaKnown RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 CCR1P32246 355 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 HARS2P49590 506 aaKnown RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SULT1E1P49888 294 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF135P52742 658 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 RNASE9P60153 205 aaKnown RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SCAPQ12770 1279 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ARL13BQ3SXY8 428 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ARHGAP29Q52LW3 1261 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 FAM78AQ5JUQ0 283 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 LRRC38Q5VT99 294 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 OTUD1Q5VV17 481 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 TRNP1Q6NT89 227 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 HTR3DQ70Z44 454 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 MTSS1LQ765P7 747 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 POLNQ7Z5Q5 900 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SLFN11Q7Z7L1 901 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 TAC4Q86UU9 113 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 KIF18BQ86Y91 864 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 UNC45BQ8IWX7 931 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SYCE1Q8N0S2 351 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 CCAR2Q8N163 923 aaKnown RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 Q8N1X5 172 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 EMC1Q8N766 993 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ARL14EPQ8N8R7 260 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 MAB21L3Q8N8X9 362 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 TDRD5Q8NAT2 981 aaKnown RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 JOSD2Q8TAC2 188 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 FAM172AQ8WUF8 416 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ATXN2LQ8WWM7 1075 aaKnown RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 USP13Q92995 863 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 NTAN1Q96AB6 310 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ELSPBP1Q96BH3 223 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 OTUB2Q96DC9 234 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SLC39A13Q96H72 371 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 C1orf74Q96LT6 269 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 CFAP57Q96MR6 1250 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF830Q96NB3 372 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 OR14A2Q96R54 314 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 TBCBQ99426 244 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 APOL5Q9BWW9 433 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 PHF7Q9BWX1 381 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SLITRK6Q9H5Y7 841 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 TRPC7Q9HCX4 862 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 PIGVQ9NUD9 493 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 THG1LQ9NWX6 298 aaKnown RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 DDIT4Q9NX09 232 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 THEGQ9P2T0 379 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SAE1Q9UBE0 346 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 SLC12A6Q9UHW9 1150 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 STOML2Q9UJZ1 356 aa5.92□□□□□ -1.46
SCAF11-213ENST00000550629 LSM7Q9UK45 103 aaKnown RBP5.92□□□□□ -1.46
SCAF11-213ENST00000550629 ZNF891A8MT65 544 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-213ENST00000550629 KCNU1A8MYU2 1149 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 MIF4GDA9UHW6 222 aaKnown RBP5.91□□□□□ -1.46
SCAF11-213ENST00000550629 PRPSAP2O60256 369 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 LRCH4O75427 683 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 STC2O76061 302 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 PRAMEF12O95522 483 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 TBX18O95935 607 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 APOEP02649 317 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 KRT7P08729 469 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 MBL2P11226 248 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-213ENST00000550629 GJA1P17302 382 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 FCARP24071 287 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 HTR7P34969 479 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 ADRA1BP35368 520 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 SLC11A2P49281 568 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 HDAC4P56524 1084 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 TBX4P57082 545 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 OGDHQ02218 1023 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 DEUP1Q05D60 604 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 FCHO2Q0JRZ9 810 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 NME3Q13232 169 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 MYBPC3Q14896 1274 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 CLUL1Q15846 466 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 HADHQ16836 314 aaKnown RBP5.91□□□□□ -1.46
SCAF11-213ENST00000550629 BOLA3Q53S33 107 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 STXBP5Q5T5C0 1151 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 PRAMEF9Q5VWM5 478 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 GET4Q7L5D6 327 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-213ENST00000550629 PHLDB2Q86SQ0 1253 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 DAAM2Q86T65 1068 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 VSIG1Q86XK7 387 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 DNAAF5Q86Y56 855 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 ARID3BQ8IVW6 561 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-213ENST00000550629 FAM217AQ8IXS0 508 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 GPR135Q8IZ08 494 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 LRRC57Q8N9N7 239 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 TRIM58Q8NG06 486 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 KIAA1524Q8TCG1 905 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 DEPDC1BQ8WUY9 529 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 TEKT4Q8WW24 435 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 PPM1EQ8WY54 764 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 ING5Q8WYH8 240 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 BTN2A3PQ96KV6 586 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 ALS2CR12Q96Q35 445 aa5.91□□□□□ -1.46
SCAF11-213ENST00000550629 SLC22A12Q96S37 553 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms