RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 TFAP2DQ7Z6R9 452 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 DHFR2Q86XF0 187 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 ADGRG5Q8IZF4 528 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 GLB1L3Q8NCI6 653 aaPredicted RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 SHCBP1Q8NEM2 672 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 FRS2Q8WU20 508 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 DACH2Q96NX9 599 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 RMDN3Q96TC7 470 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 APOBEC3GQ9HC16 384 aaKnown RBP10.73□□□□□ -0.69
RTN3-208ENST00000537981 TMEM8AQ9HCN3 771 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 TOR4AQ9NXH8 423 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 VTI1BQ9UEU0 232 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 BAG5Q9UL15 447 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 COQ4Q9Y3A0 265 aa10.73□□□□□ -0.69
RTN3-208ENST00000537981 ARID2Q68CP9 1835 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 CENPFP49454 3210 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 A6NCN8 305 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 RASAL1O95294 804 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 SEC24AO95486 1093 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 TFEBP19484 476 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 POU3F3P20264 500 aaPredicted RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 RBL1P28749 1068 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 SOX10P56693 466 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 ADARB1P78563 741 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 ROR1Q01973 937 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 NIPAL4Q0D2K0 466 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 HSPA14Q0VDF9 509 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 ILF2Q12905 390 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 PICALMQ13492 652 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 OLIG2Q13516 323 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 RFTN1Q14699 578 aaPredicted RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 SUZ12Q15022 739 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 MEP1AQ16819 746 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 SEL1L3Q68CR1 1132 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 NETO2Q8NC67 525 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 SMG8Q8ND04 991 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 ZNF280CQ8ND82 737 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 CNDP2Q96KP4 475 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 FYTTD1Q96QD9 318 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 PSKH2Q96QS6 385 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 MKRN2Q9H000 416 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 DSN1Q9H410 356 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 FBXO8Q9NRD0 319 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 SMPD3Q9NY59 655 aaPredicted RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 KCND2Q9NZV8 630 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 ZMAT5Q9UDW3 170 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 PTGES3LE9PB15 166 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 ATP6V1G2-DDX39BF2Z307 99 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 NRP2O60462 931 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 DEAF1O75398 565 aaPredicted RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 ARHGEF15O94989 841 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 NTSR2O95665 410 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 ERVK-10P10266 1014 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 NCK1P16333 377 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 EPB42P16452 691 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 CHRM3P20309 590 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 CRHBPP24387 322 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 TYK2P29597 1187 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 UQCRC1P31930 480 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 PTPN7P35236 360 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 ATP5OP48047 213 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 SLC12A1Q13621 1099 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 CTU2Q2VPK5 515 aaKnown RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 ZFP69Q49AA0 526 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 IL31Q6EBC2 164 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 LAIR2Q6ISS4 152 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 SLC39A4Q6P5W5 647 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 ADCK1Q86TW2 530 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 PHF13Q86YI8 300 aaPredicted RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 METTL4Q8N3J2 472 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 FAM109AQ8N4B1 249 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 OR7A2PQ8NGA2 310 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 LILRB1Q8NHL6 650 aaPredicted RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 PIK3R3Q92569 461 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 UNC93B1Q9H1C4 597 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 SP140LQ9H930 580 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 TNFRSF12AQ9NP84 129 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 FBXL12Q9NXK8 326 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 STMN3Q9NZ72 180 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 UBA2Q9UBT2 640 aaPredicted RBP10.72□□□□□ -0.69
RTN3-208ENST00000537981 SNX6Q9UNH7 406 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 USP22Q9UPT9 525 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 PCDHB4Q9Y5E5 795 aa10.72□□□□□ -0.69
RTN3-208ENST00000537981 VWA5AO00534 786 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 CTDSP2O14595 271 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 MTSS1O43312 755 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 DAB1O75553 588 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 SLC4A1P02730 911 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 MMP8P22894 467 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 RPS9P46781 194 aaKnown RBP10.71□□□□□ -0.69
RTN3-208ENST00000537981 GLRBP48167 497 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 EPS8Q12929 822 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 AGAP6Q5VW22 663 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 DNAJC24Q6P3W2 148 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 CASC4Q6P4E1 433 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 TIFABQ6ZNK6 161 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 STXBP4Q6ZWJ1 553 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 STRADAQ7RTN6 431 aa10.71□□□□□ -0.69
RTN3-208ENST00000537981 HAUS6Q7Z4H7 955 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms