RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PNCKQ6P2M8 343 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 EFL1Q7Z2Z2 1120 aaKnown RBP18.74■□□□□ 0.59
SPIDR-220ENST00000522900 MAP7D3Q8IWC1 876 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 CBARPQ8N350 705 aaPredicted RBP18.74■□□□□ 0.59
SPIDR-220ENST00000522900 MAML1Q92585 1016 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 USP29Q9HBJ7 922 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 KLQ9UEF7 1012 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 PHTF1Q9UMS5 762 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 PCDHB1Q9Y5F3 818 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 AK5Q9Y6K8 562 aa18.74■□□□□ 0.59
SPIDR-220ENST00000522900 GOLGA4Q13439 2230 aaKnown RBP18.74■□□□□ 0.59
SPIDR-220ENST00000522900 LRRK1Q38SD2 2015 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 EME2A4GXA9 379 aaPredicted RBP18.73■□□□□ 0.59
SPIDR-220ENST00000522900 NPIPB15A6NHN6 443 aaPredicted RBP18.73■□□□□ 0.59
SPIDR-220ENST00000522900 HEXIM1O94992 359 aaKnown RBP18.73■□□□□ 0.59
SPIDR-220ENST00000522900 RASGRP1O95267 797 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 CTSEP14091 401 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 TGM2P21980 687 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 HTR1BP28222 390 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 VIPR1P32241 457 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 TRIM23P36406 574 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 DSC2Q02487 901 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 RTP5Q14D33 572 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 NR0B2Q15466 257 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 PERM1Q5SV97 790 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 C6orf132Q5T0Z8 1188 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 ZFYVE27Q5T4F4 411 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 CRTC1Q6UUV9 634 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 HSD11B1LQ7Z5J1 315 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 TSPAN33Q86UF1 283 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 HNRNPLLQ8WVV9 542 aaKnown RBP18.73■□□□□ 0.59
SPIDR-220ENST00000522900 PIH1D2Q8WWB5 315 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 OR1E3Q8WZA6 343 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 NXPE2Q96DL1 559 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 WDR92Q96MX6 357 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 TSGA13Q96PP4 275 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 NRSN2Q9GZP1 204 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 ABCG4Q9H172 646 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 MRPL40Q9NQ50 206 aaKnown RBP18.73■□□□□ 0.59
SPIDR-220ENST00000522900 RBM22Q9NW64 420 aaKnown RBP eCLIP18.73■□□□□ 0.59
SPIDR-220ENST00000522900 RAI2Q9Y5P3 530 aa18.73■□□□□ 0.59
SPIDR-220ENST00000522900 A0A1W2PQ67 120 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 C3orf70A6NLC5 250 aaPredicted RBP18.72■□□□□ 0.59
SPIDR-220ENST00000522900 AKR1B15C9JRZ8 316 aaPredicted RBP18.72■□□□□ 0.59
SPIDR-220ENST00000522900 FZD6O60353 706 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 ALPIP09923 528 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 CCNCP24863 283 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 ETV3P41162 512 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 BLKP51451 505 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 IFI16Q16666 785 aaKnown RBP18.72■□□□□ 0.59
SPIDR-220ENST00000522900 RALGPS1Q5JS13 557 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 ARMC12Q5T9G4 340 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 RFLNAQ6ZTI6 216 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 MAPK15Q8TD08 544 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 SCRN2Q96FV2 425 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 PDXPQ96GD0 296 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 RNF157Q96PX1 679 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 FGF22Q9HCT0 170 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 DTLQ9NZJ0 730 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 GULP1Q9UBP9 304 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 LCMT1Q9UIC8 334 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 PPIL1Q9Y3C6 166 aa18.72■□□□□ 0.59
SPIDR-220ENST00000522900 TLX3O43711 291 aaPredicted RBP18.71■□□□□ 0.59
SPIDR-220ENST00000522900 MTA2O94776 668 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 TNFP01375 233 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 CCNB1P14635 433 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 ARHGAP25P42331 645 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 KIAA1024LP59773 190 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 NIPAL4Q0D2K0 466 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 ELOCQ15369 112 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 TIGD7Q6NT04 549 aaPredicted RBP18.71■□□□□ 0.59
SPIDR-220ENST00000522900 ESRP1Q6NXG1 681 aaKnown RBP18.71■□□□□ 0.59
SPIDR-220ENST00000522900 Q6ZVL8 140 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 FSTL5Q8N475 847 aaPredicted RBP18.71■□□□□ 0.59
SPIDR-220ENST00000522900 OR56A4Q8NGH8 313 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 ARRDC2Q8TBH0 407 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 NUS1Q96E22 293 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 MCCC1Q96RQ3 725 aaPredicted RBP18.71■□□□□ 0.59
SPIDR-220ENST00000522900 POLR1EQ9GZS1 481 aaKnown RBP18.71■□□□□ 0.59
SPIDR-220ENST00000522900 EVA1BQ9NVM1 165 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 NCKIPSDQ9NZQ3 722 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 SIRPGQ9P1W8 387 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 PADI4Q9UM07 663 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 LHX6Q9UPM6 363 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 DOLKQ9UPQ8 538 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 HYOU1Q9Y4L1 999 aa18.71■□□□□ 0.59
SPIDR-220ENST00000522900 NBEAQ8NFP9 2946 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 LRRD1A4D1F6 860 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 CACNB4O00305 520 aaPredicted RBP18.7■□□□□ 0.58
SPIDR-220ENST00000522900 CSO75390 466 aaKnown RBP18.7■□□□□ 0.58
SPIDR-220ENST00000522900 HLA-DQB2P05538 268 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 HOXC4P09017 264 aaPredicted RBP18.7■□□□□ 0.58
SPIDR-220ENST00000522900 CYP2A6P11509 494 aaPredicted RBP18.7■□□□□ 0.58
SPIDR-220ENST00000522900 COL28A1Q2UY09 1125 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 ALG1LQ6GMV1 187 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 PKD1L2Q7Z442 2459 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 CNGA4Q8IV77 575 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 SFTPA2Q8IWL1 248 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 PLD5Q8N7P1 536 aa18.7■□□□□ 0.58
SPIDR-220ENST00000522900 CCNYQ8ND76 341 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms