RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 USP17L23D6RBM5 183 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 F5H0A9 414 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 EIF4G3O43432 1585 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 SEC14L2O76054 403 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 FAM90A13PP0C7W8 464 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 FAM90A24PP0C7X0 464 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 HSPA1AP0DMV8 641 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 HSPA1BP0DMV9 641 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 GPTP24298 496 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 ARRB2P32121 409 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 RFX5P48382 616 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 AMTP48728 403 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 GNAQP50148 359 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 CCR9P51686 369 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 PMS2P54278 862 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 FOXG1P55316 489 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 RRP1P56182 461 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 LINC00205P59089 165 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 RPL7AP62424 266 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 SOWAHAQ2M3V2 549 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 TCTN1Q2MV58 587 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 SLC4A8Q2Y0W8 1093 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 TDRD12Q587J7 1177 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 C8orf82Q6P1X6 216 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 KLHL24Q6TFL4 600 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 DIS3L2Q8IYB7 885 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 PRR26Q8N8Z3 221 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 EXOC6Q8TAG9 804 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 METTL6Q8TCB7 284 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 NEK9Q8TD19 979 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 ASB5Q8WWX0 329 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 TRIB2Q92519 343 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 HDAC2Q92769 488 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 BBS4Q96RK4 519 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 TESK2Q96S53 571 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 NTPCRQ9BSD7 190 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 HEMGNQ9BXL5 484 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 NUF2Q9BZD4 464 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 RANBP17Q9H2T7 1088 aaKnown RBP3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 EBF3Q9H4W6 596 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 CYSLTR2Q9NS75 346 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 MYO6Q9UM54 1294 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 PTGDR2Q9Y5Y4 395 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 SCINQ9Y6U3 715 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 PLA2R1Q13018 1463 aa3.4□□□□□ -1.87
HMGB1P41-201ENST00000520234 PARD3Q8TEW0 1356 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 KDM5CP41229 1560 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 MAST1Q9Y2H9 1570 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 RTEL1-TNFRSF6BF6WH68 1400 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 PLCH2O75038 1416 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 PRAG1Q86YV5 1406 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 NPIPB11E5RHQ5 1161 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 WNT9BO14905 357 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 LDLRAD4O15165 306 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 SH3BP5O60239 455 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 KLK8O60259 260 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 NTN1O95631 604 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 GLUD1P00367 558 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CD4P01730 458 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 SNHG28P0DPA3 235 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 ETFAP13804 333 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 AGAP20933 346 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CHMP24386 653 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 GLUD2P49448 558 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 HARS2P49590 506 aaKnown RBP3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 EFNA5P52803 228 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 ABATP80404 500 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 EGR4Q05215 589 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CRYZQ08257 329 aaKnown RBP3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 DMTNQ08495 405 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CTTNQ14247 550 aaKnown RBP3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 MYBPC2Q14324 1141 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 HNF4GQ14541 408 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 SHBQ15464 509 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CCNG2Q16589 344 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 EFHC1Q5JVL4 640 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CDC73Q6P1J9 531 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 RSRC2Q7L4I2 434 aaKnown RBP3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 LINGO2Q7L985 606 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 GSTA5Q7RTV2 222 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CCDC105Q8IYK2 499 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 ZCCHC9Q8N567 271 aaKnown RBP3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 NGEFQ8N5V2 710 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 PARP16Q8N5Y8 322 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 MIGA1Q8NAN2 632 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CADM4Q8NFZ8 388 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 OR14A16Q8NHC5 309 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 TDRD7Q8NHU6 1098 aaKnown RBP3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 ETNPPLQ8TBG4 499 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 GPT2Q8TD30 523 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 ADAMTS15Q8TE58 950 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 OIT3Q8WWZ8 545 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 FAM149B1Q96BN6 582 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 LYZL4Q96KX0 146 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 SLITRK1Q96PX8 696 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 TMEM204Q9BSN7 226 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 PANK2Q9BZ23 570 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 UBA5Q9GZZ9 404 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 PLEKHA4Q9H4M7 779 aa3.39□□□□□ -1.87
HMGB1P41-201ENST00000520234 CLK4Q9HAZ1 481 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms