RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 DEUP1Q05D60 604 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 TCEA2Q15560 299 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 SLC25A52Q3SY17 297 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 AMZ1Q400G9 498 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 INO80DQ53TQ3 878 aaPredicted RBP9.18□□□□□ -0.94
CAST-220ENST00000508117 KCTD16Q68DU8 428 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 FOXR2Q6PJQ5 311 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 BNIPLQ7Z465 357 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 HEATR4Q86WZ0 1026 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 SFTPA2Q8IWL1 248 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 CCDC13Q8IYE1 715 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 BMPERQ8N8U9 685 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 SNX21Q969T3 373 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 HMCESQ96FZ2 354 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 GSDMAQ96QA5 445 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 WRAP53Q9BUR4 548 aaKnown RBP9.18□□□□□ -0.94
CAST-220ENST00000508117 TTYH3Q9C0H2 523 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 TMEM168Q9H0V1 697 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 FGF22Q9HCT0 170 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 TMEM184BQ9Y519 407 aaPredicted RBP9.18□□□□□ -0.94
CAST-220ENST00000508117 SHANK1Q9Y566 2161 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 KCNMB2Q9Y691 235 aa9.18□□□□□ -0.94
CAST-220ENST00000508117 LOC101059948A0A1B0GTJ6 334 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 TRIM49BA6NDI0 452 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 TMEM202A6NGA9 273 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 SRGAP2O75044 1071 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 IGSF6O95976 241 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 ERBB2P04626 1255 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 PRKCGP05129 697 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 PRKAR1AP10644 381 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 CCNB1P14635 433 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 TCN2P20062 427 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 BMP6P22004 513 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 ALDH4A1P30038 563 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 SULT1E1P49888 294 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 COPB1P53618 953 aaKnown RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 MARSP56192 900 aaKnown RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 PEX6Q13608 980 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 MAP7Q14244 749 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 BECN1Q14457 450 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 GRM3Q14832 879 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 UGP2Q16851 508 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 DEFB109BQ30KR1 87 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 LRRC73Q5JTD7 316 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 FOXD4L5Q5VV16 416 aaPredicted RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 TMEM71Q6P5X7 295 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 NLRP14Q86W24 1093 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 HSCBQ8IWL3 235 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 DRC7Q8IY82 874 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 FOXD4L4Q8WXT5 416 aaPredicted RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 STARD8Q92502 1023 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 FUBP1Q96AE4 644 aaKnown RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 ZNF775Q96BV0 537 aaPredicted RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 RTP4Q96DX8 246 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 USB1Q9BQ65 265 aaKnown RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 INTS2Q9H0H0 1204 aaKnown RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 UBE2TQ9NPD8 197 aaPredicted RBP9.17□□□□□ -0.94
CAST-220ENST00000508117 ACP6Q9NPH0 428 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 FBXO8Q9NRD0 319 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 COQ6Q9Y2Z9 468 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 POLQO75417 2590 aa9.17□□□□□ -0.94
CAST-220ENST00000508117 IGHV1OR21-1A0A087WYE8 117 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 BECN2A8MW95 431 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 PDE2AO00408 941 aaPredicted RBP9.16□□□□□ -0.94
CAST-220ENST00000508117 KDELR3O43731 214 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 TMCC1O94876 653 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 ZNF202O95125 648 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 FGF1P05230 155 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 RHOQP17081 205 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 GNLYP22749 145 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 XPAP23025 273 aaPredicted RBP9.16□□□□□ -0.94
CAST-220ENST00000508117 ELAVL4P26378 380 aaKnown RBP9.16□□□□□ -0.94
CAST-220ENST00000508117 CLCN1P35523 988 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 MMP12P39900 470 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 LIG3P49916 1009 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 MAZP56270 477 aaKnown RBP9.16□□□□□ -0.94
CAST-220ENST00000508117 GPLD1P80108 840 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 MC2RQ01718 297 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 RAPGEF1Q13905 1077 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 CCDC40Q4G0X9 1142 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 PTPN20Q4JDL3 420 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 ATXN7L2Q5T6C5 722 aaPredicted RBP9.16□□□□□ -0.94
CAST-220ENST00000508117 MANEALQ5VSG8 457 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 ANKS6Q68DC2 871 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 ERAP2Q6P179 960 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 CEACAM20Q6UY09 585 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 ASB18Q6ZVZ8 466 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 ARCQ7LC44 396 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 MAMDC2Q7Z304 686 aaPredicted RBP9.16□□□□□ -0.94
CAST-220ENST00000508117 TRIM59Q8IWR1 403 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 PLA2G15Q8NCC3 412 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 CCL4L1Q8NHW4 92 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 ZDHHC1Q8WTX9 485 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 DHTKD1Q96HY7 919 aaPredicted RBP9.16□□□□□ -0.94
CAST-220ENST00000508117 SPATA32Q96LK8 384 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 TBCBQ99426 244 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 GSDMCQ9BYG8 508 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 PCDH12Q9NPG4 1184 aa9.16□□□□□ -0.94
CAST-220ENST00000508117 MRPL40Q9NQ50 206 aaKnown RBP9.16□□□□□ -0.94
CAST-220ENST00000508117 SPATS2LQ9NUQ6 558 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms