RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ADRA1DP25100 572 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 ADPRHP54922 357 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 RPS21P63220 83 aaKnown RBP16.9■□□□□ 0.3
CCM2-205ENST00000472223 SGCGQ13326 291 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 OLIG2Q13516 323 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 SEPT6Q14141 434 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 POU6F1Q14863 301 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 TAF1AQ15573 450 aaPredicted RBP16.9■□□□□ 0.3
CCM2-205ENST00000472223 TMEM52BQ4KMG9 183 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 ARMC3Q5W041 872 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 DENND2CQ68D51 928 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 TSSK4Q6SA08 328 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 WDR5BQ86VZ2 330 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 LRRN4CLQ8ND94 238 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 SEC14L1Q92503 715 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 TOE1Q96GM8 510 aaKnown RBP16.9■□□□□ 0.3
CCM2-205ENST00000472223 SERPINB12Q96P63 405 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 MCCC1Q96RQ3 725 aaPredicted RBP16.9■□□□□ 0.3
CCM2-205ENST00000472223 RAD18Q9NS91 495 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.9■□□□□ 0.3
CCM2-205ENST00000472223 PKD2L2Q9NZM6 624 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 SERGEFQ9UGK8 458 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 ZNF711Q9Y462 761 aa16.9■□□□□ 0.3
CCM2-205ENST00000472223 NPIPB15A6NHN6 443 aaPredicted RBP16.89■□□□□ 0.29
CCM2-205ENST00000472223 PSMD11O00231 422 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 AREL1O15033 823 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 SLC4A1P02730 911 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 PIRTP0C851 137 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 MMP12P39900 470 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 GRIA1P42261 906 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 FNTBP49356 437 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 ACOX1Q15067 660 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 ZNF528Q3MIS6 628 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 PCID2Q5JVF3 399 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 ZDHHC20Q5W0Z9 365 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 DENND5AQ6IQ26 1287 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 CRTC1Q6UUV9 634 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 ZCCHC9Q8N567 271 aaKnown RBP16.89■□□□□ 0.29
CCM2-205ENST00000472223 RLN3Q8WXF3 142 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 VOPP1Q96AW1 172 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 PRRX2Q99811 253 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 NAT9Q9BTE0 207 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 WRAP53Q9BUR4 548 aaKnown RBP16.89■□□□□ 0.29
CCM2-205ENST00000472223 GDF3Q9NR23 364 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 PIH1D1Q9NWS0 290 aaKnown RBP16.89■□□□□ 0.29
CCM2-205ENST00000472223 WSB2Q9NYS7 404 aaPredicted RBP16.89■□□□□ 0.29
CCM2-205ENST00000472223 MAD1L1Q9Y6D9 718 aa16.89■□□□□ 0.29
CCM2-205ENST00000472223 STX7O15400 261 aaKnown RBP16.88■□□□□ 0.29
CCM2-205ENST00000472223 RNGTTO60942 597 aaKnown RBP16.88■□□□□ 0.29
CCM2-205ENST00000472223 TM7SF2O76062 418 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 LPOP22079 712 aaPredicted RBP16.88■□□□□ 0.29
CCM2-205ENST00000472223 MGAT1P26572 445 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 ACSL1P33121 698 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 CNR2P34972 360 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 HADHAP40939 763 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 LIG3P49916 1009 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 ANGPT1Q15389 498 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 SKIDA1Q1XH10 827 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 BBS9Q3SYG4 887 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 CERCAMQ5T4B2 595 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 LRRC66Q68CR7 880 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 CCDC25Q86WR0 208 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 CCNJLQ8IV13 435 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 RAVER1Q8IY67 606 aaKnown RBP16.88■□□□□ 0.29
CCM2-205ENST00000472223 FBXO25Q8TCJ0 367 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 PTCD2Q8WV60 388 aaKnown RBP16.88■□□□□ 0.29
CCM2-205ENST00000472223 FAM131CQ96AQ9 280 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 LRRC39Q96DD0 335 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 RANBP9Q96S59 729 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 FMO2Q99518 471 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 GPR174Q9BXC1 333 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 PCED1AQ9H1Q7 454 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 GRHL1Q9NZI5 618 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 ITM2BQ9Y287 266 aa16.88■□□□□ 0.29
CCM2-205ENST00000472223 CACNA1IQ9P0X4 2223 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 IGHV1OR15-9A0A0B4J2B8 117 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 RGSL1A5PLK6 1076 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 EIF3HO15372 352 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCM2-205ENST00000472223 GALR2O43603 387 aaPredicted RBP16.87■□□□□ 0.29
CCM2-205ENST00000472223 MMP20O60882 483 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 AVILO75366 819 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 RPP40O75818 363 aaKnown RBP16.87■□□□□ 0.29
CCM2-205ENST00000472223 CLDN7O95471 211 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 PAMP19021 973 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 HMGCLP35914 325 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 NUDT1P36639 197 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 SEMG2Q02383 582 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 RPL6Q02878 288 aaKnown RBP16.87■□□□□ 0.29
CCM2-205ENST00000472223 MAP7D1Q3KQU3 841 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 LIPIQ6XZB0 460 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 LYSMD3Q7Z3D4 306 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 CAND1Q86VP6 1230 aaKnown RBP16.87■□□□□ 0.29
CCM2-205ENST00000472223 HORMAD1Q86X24 394 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 EIF1ADQ8N9N8 165 aaKnown RBP16.87■□□□□ 0.29
CCM2-205ENST00000472223 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.87■□□□□ 0.295e-8■■■■■ 65.3
CCM2-205ENST00000472223 FOXJ1Q92949 421 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 CDH19Q9H159 772 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 ZSCAN32Q9NX65 697 aa16.87■□□□□ 0.29
CCM2-205ENST00000472223 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCM2-205ENST00000472223 INVSQ9Y283 1065 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms