RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 DESP17661 470 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 NDST2P52849 883 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 POLE2P56282 527 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 CLCA4Q14CN2 919 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 MIIPQ5JXC2 388 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 AFMIDQ63HM1 303 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 IL22RA1Q8N6P7 574 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 CCDC185Q8N715 623 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 OR4D9Q8NGE8 314 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 GPT2Q8TD30 523 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 TEFMQ96QE5 360 aaKnown RBP14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 TMEM168Q9H0V1 697 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 SEMA6CQ9H3T2 930 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 PDFQ9HBH1 243 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 NOCTQ9UK39 431 aaKnown RBP14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 LRRK2Q5S007 2527 aa14.34□□□□□ -0.11
LYSMD3-202ENST00000453259 LRRK1Q38SD2 2015 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 PRSS38A1L453 326 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 CLEC18AA5D8T8 446 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 ZNF891A8MT65 544 aaPredicted RBP14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 B4E171 279 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 INSIG1O15503 277 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 PRAMEF11O60813 436 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 CALB1P05937 261 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 WT1P19544 449 aaPredicted RBP14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 MAN1A1P33908 653 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 TSPAN7P41732 249 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 LIMK2P53671 638 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 FOXK1P85037 733 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 NSUN2Q08J23 767 aaKnown RBP eCLIP14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 RFTN1Q14699 578 aaPredicted RBP14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 CYTH1Q15438 398 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 CLEC18BQ6UXF7 455 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 LIPIQ6XZB0 460 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 DPPA4Q7L190 304 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 TMPRSS9Q7Z410 1059 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 PLA2G15Q8NCC3 412 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 CLEC18CQ8NCF0 446 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 C3orf20Q8ND61 904 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 EXOC2Q96KP1 924 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 CYP4F12Q9HCS2 524 aa14.33□□□□□ -0.12
LYSMD3-202ENST00000453259 IGHV5-10-1A0A0J9YXX1 117 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 B4GAT1O43505 415 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 GPD1P21695 349 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 TEAD1P28347 426 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 ERCC5P28715 1186 aaPredicted RBP14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 CSTF2P33240 577 aaKnown RBP eCLIP14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 UGT1A3P35503 534 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 NSFP46459 744 aaKnown RBP14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 AP1S1P61966 158 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 CYP4F2P78329 520 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 GPLD1P80108 840 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 RALGDSQ12967 914 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 BIRC2Q13490 618 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 BECN1Q14457 450 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 TCEA2Q15560 299 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 CRTC2Q53ET0 693 aaPredicted RBP14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 PNCKQ6P2M8 343 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 CAMK1DQ8IU85 385 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 ZDHHC1Q8WTX9 485 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 KIAA1143Q96AT1 154 aaPredicted RBP14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 SLC45A3Q96JT2 553 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 ZPBPQ9BS86 351 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 EPN3Q9H201 632 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 LRRC19Q9H756 370 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 RDH14Q9HBH5 336 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 PHPT1Q9NRX4 125 aaPredicted RBP14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 DACH1Q9UI36 760 aa14.32□□□□□ -0.12
LYSMD3-202ENST00000453259 ARHGAP42A6NI28 874 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 SIGLEC16A6NMB1 481 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 BUB1BO60566 1050 aaPredicted RBP14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 FGF3P11487 239 aaPredicted RBP14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 CCL4P13236 92 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 EEF1GP26641 437 aaKnown RBP14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 CD1CP29017 333 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 ALDH4A1P30038 563 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 RFC1P35251 1148 aaPredicted RBP14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 ZNF143P52747 638 aaPredicted RBP14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 MC1RQ01726 317 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 FMO1Q01740 532 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 BCL2L1Q07817 233 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 RAB6CQ53S08 254 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 DCAF12Q5T6F0 453 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 TMCO4Q5TGY1 634 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 KCTD16Q68DU8 428 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 SRLQ86TD4 932 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 PHF13Q86YI8 300 aaPredicted RBP14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 CACNA2D3Q8IZS8 1091 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 JOSD2Q8TAC2 188 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 CCDC74BQ96LY2 380 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 C11orf70Q9BRQ4 267 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 SELENOOQ9BVL4 669 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 TEX101Q9BY14 249 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 KLC2Q9H0B6 622 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 RAB6CQ9H0N0 254 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 CARS2Q9HA77 564 aaKnown RBP14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 MRPL40Q9NQ50 206 aaKnown RBP14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 ADAM22Q9P0K1 906 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 DOPEY2Q9Y3R5 2298 aa14.31□□□□□ -0.12
LYSMD3-202ENST00000453259 SDK2Q58EX2 2172 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms