RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TIMP2P16035 220 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 BRD2P25440 801 aaKnown RBP11.22□□□□□ -0.61
CSTF3-203ENST00000438862 VARSP26640 1264 aaKnown RBP11.22□□□□□ -0.61
CSTF3-203ENST00000438862 OR1E1P30953 314 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 ZNF165P49910 485 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 INPP5AQ14642 412 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 ANO6Q4KMQ2 910 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 CBWD6Q4V339 395 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 CBWD3Q5JTY5 395 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 CBWD5Q5RIA9 395 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 ACBD5Q5T8D3 534 aaPredicted RBP11.22□□□□□ -0.61
CSTF3-203ENST00000438862 LRRC31Q6UY01 552 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 CEACAM20Q6UY09 585 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 C17orf82Q86X59 251 aaPredicted RBP11.22□□□□□ -0.61
CSTF3-203ENST00000438862 FAM129CQ86XR2 697 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 SMYD4Q8IYR2 804 aaPredicted RBP11.22□□□□□ -0.61
CSTF3-203ENST00000438862 UNC5BQ8IZJ1 945 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 RYBPQ8N488 228 aaPredicted RBP11.22□□□□□ -0.61
CSTF3-203ENST00000438862 NELFBQ8WX92 580 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 RTP4Q96DX8 246 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 CEP63Q96MT8 703 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 KLHL32Q96NJ5 620 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 SPON2Q9BUD6 331 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 SLC29A3Q9BZD2 475 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 OCIAD1Q9NX40 245 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 COX16Q9P0S2 106 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 TLK1Q9UKI8 766 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 POLHQ9Y253 713 aa11.22□□□□□ -0.61
CSTF3-203ENST00000438862 TMEM184BQ9Y519 407 aaPredicted RBP11.22□□□□□ -0.61
CSTF3-203ENST00000438862 ARHGEF17Q96PE2 2063 aaPredicted RBP11.21□□□□□ -0.61
CSTF3-203ENST00000438862 DRGXA6NNA5 263 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 TCP11X1B4DZS4 312 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 KRIT1O00522 736 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 TNFRSF10CO14798 259 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 INPP4BO15327 924 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 HNRNPRO43390 633 aaKnown RBP11.21□□□□□ -0.61
CSTF3-203ENST00000438862 GNA14O95837 355 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 UGT2B4P06133 528 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 CCNYL3P0C7X3 344 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 THRAP10827 490 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 EPB41P11171 864 aaKnown RBP11.21□□□□□ -0.61
CSTF3-203ENST00000438862 KELP23276 732 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 SUOXP51687 545 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 SNRPD1P62314 119 aaKnown RBP11.21□□□□□ -0.61
CSTF3-203ENST00000438862 MC2RQ01718 297 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 AGERQ15109 404 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 WSCD2Q2TBF2 565 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 TMEM52BQ4KMG9 183 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 EFHC1Q5JVL4 640 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 ATP1A1-AS1Q5TC04 95 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 TCERG1LQ5VWI1 586 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 TTI2Q6NXR4 508 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 GDPD4Q6W3E5 623 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 ZC3H18Q86VM9 953 aaKnown RBP11.21□□□□□ -0.61
CSTF3-203ENST00000438862 SFTPA2Q8IWL1 248 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 DEFB106AQ8N104 65 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 BMPERQ8N8U9 685 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 OR7D4Q8NG98 312 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 OR56A4Q8NGH8 313 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 ATP13A1Q9HD20 1204 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 FBXO8Q9NRD0 319 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 ERRFI1Q9UJM3 462 aaPredicted RBP11.21□□□□□ -0.61
CSTF3-203ENST00000438862 PHTF1Q9UMS5 762 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 MAPK8IP1Q9UQF2 711 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 ZFHX3Q15911 3703 aa11.21□□□□□ -0.61
CSTF3-203ENST00000438862 F8P00451 2351 aa11.21□□□□□ -0.62
CSTF3-203ENST00000438862 E5RJQ4 531 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 CETN3O15182 167 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 RECKO95980 971 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 GSRP00390 522 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 GKP32189 559 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 PMS2P54278 862 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 GEMIN4P57678 1058 aaKnown RBP11.2□□□□□ -0.62
CSTF3-203ENST00000438862 ARF5P84085 180 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 MYL5Q02045 173 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 ELP6Q0PNE2 266 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 LRMPQ12912 555 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 NME3Q13232 169 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 BIRC2Q13490 618 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 MTM1Q13496 603 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 MAP7Q14244 749 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 IQCB1Q15051 598 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 POLD3Q15054 466 aaPredicted RBP11.2□□□□□ -0.62
CSTF3-203ENST00000438862 INPP5JQ15735 1006 aaPredicted RBP11.2□□□□□ -0.62
CSTF3-203ENST00000438862 MEA1Q16626 185 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 MYLK3Q32MK0 819 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 ANKRD40Q6AI12 368 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 TMEM71Q6P5X7 295 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 APLFQ8IW19 511 aaPredicted RBP11.2□□□□□ -0.62
CSTF3-203ENST00000438862 ESX1Q8N693 406 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 OR2AP1Q8NGE2 309 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 PDXPQ96GD0 296 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 TCTN2Q96GX1 697 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 C1orf74Q96LT6 269 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 C5orf34Q96MH7 638 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 SLC2A13Q96QE2 648 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 WRAP53Q9BUR4 548 aaKnown RBP11.2□□□□□ -0.62
CSTF3-203ENST00000438862 TM6SF2Q9BZW4 377 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 TMEM168Q9H0V1 697 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms