RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 MRGPRX4Q96LA9 322 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 IMMP1LQ96LU5 166 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MAGEB10Q96LZ2 347 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 LINC00477Q96M19 166 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF560Q96MR9 790 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 C18orf15Q96N68 181 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 FOPNLQ96NB1 174 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 LRFN5Q96NI6 719 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RUNDC3BQ96NL0 473 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ACAP3Q96P50 834 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 WDFY2Q96P53 400 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GPR78Q96P69 363 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RANBP9Q96S59 729 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SMC6Q96SB8 1091 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CD180Q99467 661 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MPHOSPH8Q99549 860 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 NABP2Q9BQ15 211 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RTP3Q9BQQ7 232 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 RIOK1Q9BRS2 568 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 POLR3CQ9BUI4 534 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MSTO1Q9BUK6 570 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DDX23Q9BUQ8 820 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ADI1Q9BV57 179 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 OSBPL11Q9BXB4 747 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 VN1R3Q9BXE9 311 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DGCR6LQ9BY27 220 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 P2RY12Q9H244 342 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PNNQ9H307 717 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CXorf36Q9H7Y0 433 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 C10orf88Q9H8K7 445 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PCDH9Q9HC56 1237 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 MRS2Q9HD23 443 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 Q9N2K0 584 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 CABP5Q9NP86 173 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SIX2Q9NPC8 291 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 NMRK2Q9NPI5 230 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GNL3LQ9NVN8 582 aaKnown RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 NDE1Q9NXR1 346 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 VNN3Q9NY84 501 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 STOX2Q9P2F5 926 aaPredicted RBP-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 VTI1BQ9UEU0 232 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PRKAG3Q9UGI9 489 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PARP2Q9UGN5 583 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KCNG1Q9UIX4 513 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 GGT7Q9UJ14 662 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TUBD1Q9UJT1 453 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ACAD8Q9UKU7 415 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TMPRSS11EQ9UL52 423 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KCNS2Q9ULS6 477 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ABCG2Q9UNQ0 655 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 USP22Q9UPT9 525 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 DNAJC16Q9Y2G8 782 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF835Q9Y2P0 537 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 KLHDC2Q9Y2U9 406 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 AMDHD2Q9Y303 409 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 SNX9Q9Y5X1 595 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PSAT1Q9Y617 370 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM208BQ5VWN6 2430 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 STARD9Q9P2P6 4700 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 PALLDQ8WX93 1383 aa-0.32□□□□□ -2.46
TRAJ28-201ENST00000390509 TDRD6O60522 2096 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 UBR5O95071 2799 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KMT2AQ03164 3969 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KAT6AQ92794 2004 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GPR179Q6PRD1 2367 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF646O15015 1829 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 IGLV1-50A0A075B6I6 118 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 IGKV1D-37A0A075B6S9 117 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 A0A087WZ62 844 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TRBV5-7A0A0A0MS05 114 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 IGKV2-24A0A0C4DH68 120 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 LOC101059915A0A1B0GWI6 518 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PTPDC1A2A3K4 754 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 C17orf102A2RUQ5 167 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CXorf65A6NEN9 183 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZSCAN5BA6NJL1 495 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DUXAA6NLW8 204 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 USP27XA6NNY8 438 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MPTX1A8MV57 137 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 A8MV72 311 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 A8MX80 341 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 B2RBV5 119 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ANKRD63C9JTQ0 380 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 E9PAM4 449 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 hCG_1984214I3L0E3 225 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 EEF2KO00418 725 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KIF3BO15066 747 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MID1O15344 667 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ADAM12O43184 909 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 HCRTO43612 131 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KDM1AO60341 852 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TSPAN3O60637 253 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 N4BP1O75113 896 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ICOSLGO75144 302 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF217O75362 1048 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CDC123O75794 336 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GLRX3O76003 335 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DDAH1O94760 285 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 NADKO95544 446 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CLDN1O95832 211 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms