RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CCL4L1Q8NHW4 92 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 PCSK1NQ9UHG2 260 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 CFAP46Q8IYW2 2715 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 COL6A6A6NMZ7 2263 aa23.19■■□□□ 1.3
U2AF1-202ENST00000380276 CFAP69A5D8W1 941 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 TMCO5BA8MYB1 307 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 NVLO15381 856 aaKnown RBP23.18■■□□□ 1.3
U2AF1-202ENST00000380276 ETV5P41161 510 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 CSNK1DP48730 415 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 SCNN1BP51168 640 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 POLR2LP62875 67 aaKnown RBP23.18■■□□□ 1.3
U2AF1-202ENST00000380276 CA9Q16790 459 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 AMZ1Q400G9 498 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 PPP1R15BQ5SWA1 713 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 DENND2CQ68D51 928 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 ACAD10Q6JQN1 1059 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 ZFAND4Q86XD8 727 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 MCOLN2Q8IZK6 566 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 KIAA1524Q8TCG1 905 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 USP7Q93009 1102 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 TRIM4Q9C037 500 aa23.18■■□□□ 1.3
U2AF1-202ENST00000380276 AKAP7Q9P0M2 348 aaPredicted RBP23.18■■□□□ 1.3
U2AF1-202ENST00000380276 GOLGA6CA6NDK9 693 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 GOLGA6BA6NDN3 693 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 WISP1O95388 367 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 GOLGA6DP0CG33 693 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 HLTFQ14527 1009 aaKnown RBP eCLIP23.17■■□□□ 1.3
U2AF1-202ENST00000380276 TSR1Q2NL82 804 aaKnown RBP23.17■■□□□ 1.3
U2AF1-202ENST00000380276 LINC00303Q3SY05 128 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 PPP6R3Q5H9R7 873 aaPredicted RBP23.17■■□□□ 1.3
U2AF1-202ENST00000380276 OGFOD3Q6PK18 319 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 ARHGAP36Q6ZRI8 547 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 DPPA4Q7L190 304 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 ZSCAN1Q8NBB4 408 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 PDCD6IPQ8WUM4 868 aaKnown RBP23.17■■□□□ 1.3
U2AF1-202ENST00000380276 TMEM159Q96B96 161 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 LGR4Q9BXB1 951 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 CARS2Q9HA77 564 aaKnown RBP23.17■■□□□ 1.3
U2AF1-202ENST00000380276 GOLGA6AQ9NYA3 693 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 FOXJ2Q9P0K8 574 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 ACSL6Q9UKU0 697 aa23.17■■□□□ 1.3
U2AF1-202ENST00000380276 PRSS38A1L453 326 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 RHPN2P1A8MT19 583 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 LGALS16A8MUM7 142 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 PDE2AO00408 941 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-202ENST00000380276 ATMINO43313 823 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-202ENST00000380276 PNLIPP16233 465 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 ERCC2P18074 760 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 CDK11BP21127 795 aaKnown RBP23.16■■□□□ 1.3
U2AF1-202ENST00000380276 TNFAIP3P21580 790 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 MAZP56270 477 aaKnown RBP23.16■■□□□ 1.3
U2AF1-202ENST00000380276 ZFP36L1Q07352 338 aaKnown RBP23.16■■□□□ 1.3
U2AF1-202ENST00000380276 RFX8Q6ZV50 586 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 NUS1Q96E22 293 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 KCTD15Q96SI1 283 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-202ENST00000380276 SNRNP25Q9BV90 132 aaKnown RBP23.16■■□□□ 1.3
U2AF1-202ENST00000380276 SEMA6CQ9H3T2 930 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 RDH14Q9HBH5 336 aa23.16■■□□□ 1.3
U2AF1-202ENST00000380276 ASH1LQ9NR48 2969 aaKnown RBP23.16■■□□□ 1.3
U2AF1-202ENST00000380276 SCN8AQ9UQD0 1980 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 TTC24A2A3L6 582 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-202ENST00000380276 TNFRSF10CO14798 259 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 NUDT21O43809 227 aaKnown RBP23.15■■□□□ 1.3
U2AF1-202ENST00000380276 CCDC172P0C7W6 258 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 FERP16591 822 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 ALDH4A1P30038 563 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 NFKB2Q00653 900 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 ERMARDQ5T6L9 678 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 PNCKQ6P2M8 343 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 TMPRSS9Q7Z410 1059 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 PIM3Q86V86 326 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 PELI3Q8N2H9 469 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 ZDHHC1Q8WTX9 485 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 JPH3Q8WXH2 748 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-202ENST00000380276 ECHDC3Q96DC8 303 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 PHPT1Q9NRX4 125 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-202ENST00000380276 TAS2R14Q9NYV8 317 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 B4GALT6Q9UBX8 382 aa23.15■■□□□ 1.3
U2AF1-202ENST00000380276 RNF8O76064 485 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 FAM87AP0C7U9 286 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 PPM1FP49593 454 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-202ENST00000380276 OR1D5P58170 312 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 IL10RBQ08334 325 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 ILF3Q12906 894 aaKnown RBP eCLIP23.14■■□□□ 1.29
U2AF1-202ENST00000380276 ZNF235Q14590 738 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 RFTN1Q14699 578 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-202ENST00000380276 LBRQ14739 615 aaKnown RBP23.14■■□□□ 1.29
U2AF1-202ENST00000380276 TMEM164Q5U3C3 297 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 AFMIDQ63HM1 303 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 SLITRK4Q8IW52 837 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 ARHGAP12Q8IWW6 846 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 PEBP4Q96S96 227 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 GSDMCQ9BYG8 508 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 ZMYND15Q9H091 742 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 PARVAQ9NVD7 372 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 SEPT3Q9UH03 358 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 LIMA1Q9UHB6 759 aaKnown RBP23.14■■□□□ 1.29
U2AF1-202ENST00000380276 PCDHGA4Q9Y5G9 962 aa23.14■■□□□ 1.29
U2AF1-202ENST00000380276 FLNBO75369 2602 aaKnown RBP23.14■■□□□ 1.29
U2AF1-202ENST00000380276 TENM4Q6N022 2769 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms