RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	FAM111A	Q96PZ2	611 aa		11.74	□□□□□ -0.53
LMO7-204	ENST00000377499	NKX2-4	Q9H2Z4	354 aa		11.74	□□□□□ -0.53
LMO7-204	ENST00000377499	RFXAP	O00287	272 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	TFPT	P0C1Z6	253 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	CDK18	Q07002	472 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	UTS2B	Q765I0	119 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	SETD3	Q86TU7	594 aa	Predicted RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	LPCAT1	Q8NF37	534 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	TCP10L	Q8TDR4	215 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	NSRP1	Q9H0G5	558 aa	Known RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	TRPV5	Q9NQA5	729 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	TDP1	Q9NUW8	608 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	PDP2	Q9P2J9	529 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	DOCK6	Q96HP0	2047 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	LINC00854	A0A1B0GVQ3	168 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	CLASP2	O75122	1294 aa	Known RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	RB1	P06400	928 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	ACADS	P16219	412 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	UBE3A	Q05086	875 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	MPP2	Q14168	576 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	MPPE1	Q53F39	396 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	AFMID	Q63HM1	303 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	RETSAT	Q6NUM9	610 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	TSNARE1	Q96NA8	513 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	HEPH	Q9BQS7	1158 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	PSAT1	Q9Y617	370 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	PCP4L1	A6NKN8	68 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	KDELR3	O43731	214 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	KDM1A	O60341	852 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	SUN1	O94901	812 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	LINC00271	P0C7V0	271 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	MAGEA3	P43357	314 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	SERPINB9	P50453	376 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	SLC12A2	P55011	1212 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	CTBP1	Q13363	440 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	KCTD11	Q693B1	232 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	PKN3	Q6P5Z2	889 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	TMC8	Q8IU68	726 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	GPR65	Q8IYL9	337 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	ZNF276	Q8N554	614 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	SP7	Q8TDD2	431 aa	Predicted RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	GFM2	Q969S9	779 aa	Known RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	IMP4	Q96G21	291 aa	Known RBP	11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	SERAC1	Q96JX3	654 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	TUBGCP5	Q96RT8	1024 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	FAM192A	Q9GZU8	254 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	TASP1	Q9H6P5	420 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	FGFR1OP2	Q9NVK5	253 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	SLC2A6	Q9UGQ3	507 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	WNT6	Q9Y6F9	365 aa		11.73	□□□□□ -0.53
LMO7-204	ENST00000377499	MUSK	O15146	869 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	PEX11A	O75192	247 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	PGM3	O95394	542 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	PRKCH	P24723	683 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	CHST9	Q7L1S5	443 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	ADGRD2	Q7Z7M1	963 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	PGBD5	Q8N414	524 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	FEM1A	Q9BSK4	669 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	VPS45	Q9NRW7	570 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	ABCB8	Q9NUT2	735 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	SLC39A10	Q9ULF5	831 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	SOX13	Q9UN79	622 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	NOX1	Q9Y5S8	564 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	IRAK3	Q9Y616	596 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	GNAZ	P19086	355 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	TARS	P26639	723 aa	Known RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	SPR	P35270	261 aa	Predicted RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	GP5	P40197	560 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	APCDD1	Q8J025	514 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	WFDC5	Q8TCV5	224 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	ZFR	Q96KR1	1074 aa	Known RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	LINC00597	Q9H2U6	94 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	FAM237B	A0A1B0GVD1	139 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	HEATR9	A2RTY3	570 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	FAM159B	A6NKW6	160 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499		K7ERQ8	282 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	NRG2	O14511	850 aa	Predicted RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	TXNDC9	O14530	226 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	B3GALNT1	O75752	331 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	USP1	O94782	785 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	POR	P16435	677 aa	Predicted RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	ADRA1D	P25100	572 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	HOXD9	P28356	352 aa	Predicted RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	DNAJC3	Q13217	504 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	LRRC36	Q1X8D7	754 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	RARS2	Q5T160	578 aa	Known RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	ZNF470	Q6ECI4	717 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	POTEH	Q6S545	545 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	C11orf74	Q86VG3	221 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	C7orf57	Q8NEG2	295 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	NAT14	Q8WUY8	206 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	TNKS2	Q9H2K2	1166 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	CIDEB	Q9UHD4	219 aa		11.72	□□□□□ -0.53
LMO7-204	ENST00000377499	YBX2	Q9Y2T7	364 aa	Known RBP	11.72	□□□□□ -0.53
LMO7-204	ENST00000377499		A8MX80	341 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms