RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 AP5Z1O43299 807 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 SNAP91O60641 907 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 SEC22BO75396 215 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 ABCG1P45844 678 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 TEDDM1Q5T9Z0 273 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 C17orf64Q86WR6 236 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 IFNLR1Q8IU57 520 aaPredicted RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 PDLIM2Q96JY6 352 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 FAIM2Q9BWQ8 316 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 OSBPL6Q9BZF3 934 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 CHCHD3Q9NX63 227 aaKnown RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 SIX4Q9UIU6 781 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 LDLRAP1Q5SW96 308 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 BRAT1Q6PJG6 821 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 BRSK1Q8TDC3 778 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 FOXJ1Q92949 421 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 GRAMD1AQ96CP6 724 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 THUMPD3Q9BV44 507 aaKnown RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 STRADBQ9C0K7 418 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 KCNE2Q9Y6J6 123 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 KAT6AQ92794 2004 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 HNRNPCL2B2RXH8 293 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 HNRNPCL1O60812 293 aaKnown RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 ZNF217O75362 1048 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 CMPK1P30085 196 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 CXCL12P48061 93 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 HNRNPDQ14103 355 aaKnown RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 XKR6Q5GH73 641 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 HFE2Q6ZVN8 426 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 UBE2R2Q712K3 238 aaPredicted RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 PHC3Q8NDX5 983 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 MID1IP1Q9NPA3 183 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 GDF3Q9NR23 364 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 AK5Q9Y6K8 562 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 PHGDHO43175 533 aaKnown RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 SGTAO43765 313 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 PRKCGP05129 697 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 ENO2P09104 434 aaPredicted RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 JMJD7P0C870 316 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
LIN54-201ENST00000340417 ACSM2AQ08AH3 577 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 AP5B1Q2VPB7 878 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
LIN54-201ENST00000340417 ACSM2BQ68CK6 577 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 OR2AG1Q9H205 316 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 LZTS1Q9Y250 596 aa12.85□□□□□ -0.35
LIN54-201ENST00000340417 CEBPBP17676 345 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 PPP2R1BP30154 601 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 SSTR1P30872 391 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 NTSR1P30989 418 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 GBE1Q04446 702 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 MAD2L1Q13257 205 aaPredicted RBP12.84□□□□□ -0.35
LIN54-201ENST00000340417 MYLK3Q32MK0 819 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 TAS1R3Q7RTX0 852 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 ALG9Q9H6U8 611 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 ABI3Q9P2A4 366 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 HS3ST4Q9Y661 456 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 STYXL1Q9Y6J8 313 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 PTGESO14684 152 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 OAZ2O95190 189 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 ALADP13716 330 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 ENO3P13929 434 aaPredicted RBP12.84□□□□□ -0.35
LIN54-201ENST00000340417 DRD1P21728 446 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 CCR3P51677 355 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 SKOR1P84550 965 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 UNC5AQ6ZN44 842 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 KBTBD6Q86V97 674 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 TRIML2Q8N7C3 387 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 Q8N9G6 341 aaPredicted RBP12.84□□□□□ -0.35
LIN54-201ENST00000340417 STYXQ8WUJ0 223 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 CERS2Q96G23 380 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 ECSITQ9BQ95 431 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 ANKRD36CQ5JPF3 1778 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 TMEM120BA0PK00 339 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 PRMT5O14744 637 aaPredicted RBP12.84□□□□□ -0.35
LIN54-201ENST00000340417 MMP20O60882 483 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 PIGNO95427 931 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 TCEAL8Q8IYN2 117 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 PABPC3Q9H361 631 aaKnown RBP12.84□□□□□ -0.35
LIN54-201ENST00000340417 PCDHB1Q9Y5F3 818 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 PAPPAQ13219 1627 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 ASGR2P07307 311 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 NME5P56597 212 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 PRKG2Q13237 762 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 C22orf39Q6P5X5 142 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 SLC30A9Q6PML9 568 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 PAGE2Q7Z2X7 111 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 TNIP2Q8NFZ5 429 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 C12orf66Q96MD2 445 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 SYBUQ9NX95 663 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 POLG2Q9UHN1 485 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 SLC24A2Q9UI40 661 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 TMCO1Q9UM00 188 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 ZNF840PA6NDX5 716 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 CES2O00748 559 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 LTA4HP09960 611 aaKnown RBP12.84□□□□□ -0.35
LIN54-201ENST00000340417 ZSCAN1Q8NBB4 408 aa12.84□□□□□ -0.35
LIN54-201ENST00000340417 NOA1Q8NC60 698 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms