RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	SLC20A2	Q08357	652 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	NCAPH	Q15003	741 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	CLEC16A	Q2KHT3	1053 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	TPRG1L	Q5T0D9	272 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	FKBP15	Q5T1M5	1219 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	MANEAL	Q5VSG8	457 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	NEK5	Q6P3R8	708 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	SCYL2	Q6P3W7	929 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	WDR59	Q6PJI9	974 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	ZNF783	Q6ZMS7	281 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	PARS2	Q7L3T8	475 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	PTAR1	Q7Z6K3	402 aa	Predicted RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	NLRP14	Q86W24	1093 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	TMPRSS12	Q86WS5	348 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	ZNF677	Q86XU0	584 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	ARMC10	Q8N2F6	343 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	PCDH20	Q8N6Y1	951 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	RNF214	Q8ND24	703 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	NEK11	Q8NG66	645 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	CENPI	Q92674	756 aa	Predicted RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	VOPP1	Q96AW1	172 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	SLC17A9	Q9BYT1	436 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	OSBPL2	Q9H1P3	480 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	HSD3B7	Q9H2F3	369 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	NOL6	Q9H6R4	1146 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	SEPT11	Q9NVA2	429 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	KLHL11	Q9NVR0	708 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	ADAM22	Q9P0K1	906 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	LIMA1	Q9UHB6	759 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	SALL4	Q9UJQ4	1053 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	TPX2	Q9ULW0	747 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	FADS3	Q9Y5Q0	445 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	AK5	Q9Y6K8	562 aa		7.1	□□□□□ -1.27
MARK3-215	ENST00000558787	DOCK4	Q8N1I0	1966 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787		H3BRJ5	948 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	NEMP1	O14524	444 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	CASC3	O15234	703 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	INSIG1	O15503	277 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	CCP110	O43303	1012 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	BUB1	O43683	1085 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	TLX3	O43711	291 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	CREB3	O43889	395 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	MAGEC1	O60732	1142 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	RAMP2	O60895	175 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	PIAS2	O75928	621 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	UGT2B4	P06133	528 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	C1S	P09871	688 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	GPD1	P21695	349 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	HNRNPA2B1	P22626	353 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	L1CAM	P32004	1257 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	NUDT1	P36639	197 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	PTPN9	P43378	593 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	NSF	P46459	744 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	RPL7A	P62424	266 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	RPS21	P63220	83 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	DAB2	P98082	770 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	OGDH	Q02218	1023 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	UBXN1	Q04323	297 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	CCDC15	Q0P6D6	951 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	OVGP1	Q12889	678 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	ZNF211	Q13398	564 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	FZD2	Q14332	565 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	POLD3	Q15054	466 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	MYLK3	Q32MK0	819 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	ARL13B	Q3SXY8	428 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	SOWAHC	Q53LP3	525 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	ADAMTSL4	Q6UY14	1074 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	TRIM72	Q6ZMU5	477 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	ARC	Q7LC44	396 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	STRADA	Q7RTN6	431 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	APTX	Q7Z2E3	356 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	ABI3BP	Q7Z7G0	1075 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	ZNF354C	Q86Y25	554 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	PHF13	Q86YI8	300 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	OXR1	Q8N573	874 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	TBC1D31	Q96DN5	1066 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	HMCES	Q96FZ2	354 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	FAM46A	Q96IP4	442 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	FEM1C	Q96JP0	617 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	KLHL32	Q96NJ5	620 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	BBC3	Q96PG8	261 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	KLF6	Q99612	283 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	AGPAT1	Q99943	283 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	SELENOO	Q9BVL4	669 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	CEP44	Q9C0F1	390 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	TCEAL2	Q9H3H9	227 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	TMEM248	Q9NWD8	314 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	GPATCH2L	Q9NWQ4	482 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	DNAJC28	Q9NX36	388 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	TAS2R14	Q9NYV8	317 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	DKK4	Q9UBT3	224 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	PCDHB1	Q9Y5F3	818 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	PCDHGA1	Q9Y5H4	931 aa		7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	GCN1	Q92616	2671 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-215	ENST00000558787	COL5A1	P20908	1838 aa	Predicted RBP	7.08	□□□□□ -1.28
MARK3-215	ENST00000558787	TRPM6	Q9BX84	2022 aa		7.08	□□□□□ -1.28
MARK3-215	ENST00000558787	LOC400499	M0QZD8	3231 aa		7.08	□□□□□ -1.28
MARK3-215	ENST00000558787	LY6G6E	A0A0G2JKS1	128 aa		7.08	□□□□□ -1.28
MARK3-215	ENST00000558787	KRTAP9-6	A0A140TA67	174 aa		7.08	□□□□□ -1.28

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