RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 YY2O15391 372 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 DXOO77932 396 aaKnown RBP14.25□□□□□ -0.13
SNX6-210ENST00000557341 CELA2BP08218 269 aaPredicted RBP14.25□□□□□ -0.13
SNX6-210ENST00000557341 IL1R2P27930 398 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 SCNN1BP51168 640 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 POLR2LP62875 67 aaKnown RBP14.25□□□□□ -0.13
SNX6-210ENST00000557341 RALGDSQ12967 914 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 PIGHQ14442 188 aaPredicted RBP14.25□□□□□ -0.13
SNX6-210ENST00000557341 ZNF235Q14590 738 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 LBRQ14739 615 aaKnown RBP14.25□□□□□ -0.13
SNX6-210ENST00000557341 NR1I3Q14994 352 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 C3orf38Q5JPI3 329 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 PERM1Q5SV97 790 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 CRTC1Q6UUV9 634 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 TMCO3Q6UWJ1 677 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 ENPP7Q6UWV6 458 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 DPPA4Q7L190 304 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 SDR16C5Q8N3Y7 309 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 ARL10Q8N8L6 244 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 ZNF248Q8NDW4 579 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 PCDH19Q8TAB3 1148 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 WDR48Q8TAF3 677 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 SCG3Q8WXD2 468 aaKnown RBP14.25□□□□□ -0.13
SNX6-210ENST00000557341 HSPH1Q92598 858 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 GRAMD1AQ96CP6 724 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 WDR92Q96MX6 357 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 APOOQ9BUR5 198 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 POLR1BQ9H9Y6 1135 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 KLQ9UEF7 1012 aa14.25□□□□□ -0.13
SNX6-210ENST00000557341 BZW2Q9Y6E2 419 aaKnown RBP14.25□□□□□ -0.13
SNX6-210ENST00000557341 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.24□□□□□ -0.13
SNX6-210ENST00000557341 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 CACNB4O00305 520 aaPredicted RBP14.24□□□□□ -0.13
SNX6-210ENST00000557341 SOCS5O75159 536 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 SERPINB6P35237 376 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 HSPA9P38646 679 aaKnown RBP14.24□□□□□ -0.13
SNX6-210ENST00000557341 LSSP48449 732 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 ERVPABLB-1P60509 514 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 SRP54P61011 504 aaKnown RBP14.24□□□□□ -0.13
SNX6-210ENST00000557341 CCDC173Q0VFZ6 552 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 TCEA2Q15560 299 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 BOLA3Q53S33 107 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 HGSNATQ68CP4 663 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 LVRNQ6Q4G3 990 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 GKN2Q86XP6 184 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 BBS5Q8N3I7 341 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 ATPAF2Q8N5M1 289 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 KYQ8NBH2 561 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 TSACCQ96A04 125 aaPredicted RBP14.24□□□□□ -0.13
SNX6-210ENST00000557341 PDXPQ96GD0 296 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 FCRL3Q96P31 734 aaPredicted RBP14.24□□□□□ -0.13
SNX6-210ENST00000557341 BBC3Q96PG8 261 aaPredicted RBP14.24□□□□□ -0.13
SNX6-210ENST00000557341 CCDC3Q9BQI4 270 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.24□□□□□ -0.13
SNX6-210ENST00000557341 SYNDIG1Q9H7V2 258 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 THSD1Q9NS62 852 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 PADI4Q9UM07 663 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 SATB2Q9UPW6 733 aa14.24□□□□□ -0.13
SNX6-210ENST00000557341 A0A1W2PQ67 120 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 SYCE3A1L190 88 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 EIF4E1BA6NMX2 242 aaKnown RBP14.23□□□□□ -0.13
SNX6-210ENST00000557341 TRAFD1O14545 582 aaPredicted RBP14.23□□□□□ -0.13
SNX6-210ENST00000557341 RECQL5O94762 991 aaPredicted RBP14.23□□□□□ -0.13
SNX6-210ENST00000557341 TCF4P15884 667 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 KELP23276 732 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 KIAA1024LP59773 190 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 FANCCQ00597 558 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 SLC10A7Q0GE19 358 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 SPIDRQ14159 915 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 IGF2-ASQ6U949 168 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 LIPIQ6XZB0 460 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 RD3Q7Z3Z2 195 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 POLNQ7Z5Q5 900 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 LUZP1Q86V48 1076 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 SPACA3Q8IXA5 215 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 TP53INP2Q8IXH6 220 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 NIPA2Q8N8Q9 360 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 PLA2G15Q8NCC3 412 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 TEKT4Q8WW24 435 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 SPOCK2Q92563 424 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 SYN2Q92777 582 aaPredicted RBP14.23□□□□□ -0.13
SNX6-210ENST00000557341 IQCDQ96DY2 449 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 ATXN7L3BQ96GX2 97 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 HIC2Q96JB3 615 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 CSPG4P5Q96PW8 444 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 UBL7Q96S82 380 aaPredicted RBP14.23□□□□□ -0.13
SNX6-210ENST00000557341 THAP2Q9H0W7 228 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 PRORYQ9H606 182 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 CBX8Q9HC52 389 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 ASCL3Q9NQ33 180 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 SIRPGQ9P1W8 387 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 IP6K2Q9UHH9 426 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 ANAPC7Q9UJX3 599 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 ENTPD2Q9Y5L3 495 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 DGKBQ9Y6T7 804 aa14.23□□□□□ -0.13
SNX6-210ENST00000557341 CPP00450 1065 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 TNFP01375 233 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 SERPING1P05155 500 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 RARAP10276 462 aa14.22□□□□□ -0.13
SNX6-210ENST00000557341 AMPD1P23109 780 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms