RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 RFFLQ8WZ73 363 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ELSPBP1Q96BH3 223 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 FOXRED1Q96CU9 486 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PIWIL1Q96J94 861 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SCYL1Q96KG9 808 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 C16orf92Q96LL3 132 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CFAP57Q96MR6 1250 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SLC2A13Q96QE2 648 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SLC22A12Q96S37 553 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 EIF3CQ99613 913 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TTC1Q99614 292 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NCAPGQ9BPX3 1015 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DDX50Q9BQ39 737 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CNPY3Q9BT09 278 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TRMT61BQ9BVS5 477 aaKnown RBP4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NUP85Q9BW27 656 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CARD6Q9BX69 1037 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TSGA10Q9BZW7 698 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 THAP2Q9H0W7 228 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 BRD9Q9H8M2 597 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NMUR1Q9HB89 426 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TRPV4Q9HBA0 871 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ARFGAP3Q9NP61 516 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 OBP2AQ9NY56 170 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 TBC1D14Q9P2M4 693 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 UVRAGQ9P2Y5 699 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 FTSJ1Q9UET6 329 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 IP6K2Q9UHH9 426 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 SLC12A6Q9UHW9 1150 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 LCMT1Q9UIC8 334 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ANAPC7Q9UJX3 599 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 CCL26Q9Y258 94 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF510Q9Y2H8 683 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 PCDHA13Q9Y5I0 950 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 MRFAP1Q9Y605 127 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NUMBLQ9Y6R0 609 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 DOCK6Q96HP0 2047 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 ANAPC1Q9H1A4 1944 aa4.44□□□□□ -1.7
SNHG1-208ENST00000538266 NOTCH4Q99466 2003 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 CHD7Q9P2D1 2997 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 E2F8A0AVK6 867 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TYW5A2RUC4 315 aaKnown RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 CCDC151A5D8V7 595 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 C2CD4BA6NLJ0 364 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TMEM110-MUSTN1A8MSY1 372 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 LOC730098B7Z3J9 87 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ANHXE9PGG2 379 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 H0Y858 1186 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 LEFTY2O00292 366 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 POLR3GO15318 223 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 IRAK2O43187 625 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 KRT86O43790 486 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 PRPSAP2O60256 369 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 KIF5CO60282 957 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TRIM13O60858 407 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ERLIN1O75477 346 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 STC2O76061 302 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 SEC31AO94979 1220 aaKnown RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 LCA5LO95447 670 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 NFATC1O95644 943 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 MPIG6BO95866 241 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 MOCS2O96007 188 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 KNG1P01042 644 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF28P17035 718 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 FCARP24071 287 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 CORO1AP31146 461 aaKnown RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 GDI1P31150 447 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 CHKAP35790 457 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 SSR1P43307 286 aaKnown RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 PTPN9P43378 593 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 IFNAR2P48551 515 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 VAV2P52735 878 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 GNG11P61952 73 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 RPL7AP62424 266 aaKnown RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 KIF5AQ12840 1032 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TDGQ13569 410 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 PDGFRLQ15198 375 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF77Q15935 545 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 BRMS1LQ5PSV4 323 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ZFYVE27Q5T4F4 411 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TANGO2Q6ICL3 276 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 SCYL2Q6P3W7 929 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 VITQ6UXI7 678 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 RAD9BQ6WBX8 426 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 FAM131BQ86XD5 332 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF761Q86XN6 746 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 DNAAF5Q86Y56 855 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 TMEM139Q8IV31 216 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 DENND1CQ8IV53 801 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 CCDC117Q8IWD4 279 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 MFSD6LQ8IWD5 586 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 REXO1L1PQ8IX06 675 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ZZZ3Q8IYH5 903 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 CPA6Q8N4T0 437 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 CEP112Q8N8E3 955 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ATP6V0D2Q8N8Y2 350 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 JOSD2Q8TAC2 188 aa4.43□□□□□ -1.7
SNHG1-208ENST00000538266 ZNF564Q8TBZ8 553 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-208ENST00000538266 CSGALNACT1Q8TDX6 532 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms