RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 CCR10P46092 362 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 NCAPHQ15003 741 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 UGP2Q16851 508 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 C15orf59Q2T9L4 293 aaPredicted RBP20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 PHLDB2Q86SQ0 1253 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 TAAR9Q96RI9 348 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 NCAPGQ9BPX3 1015 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 TMEM51Q9NW97 253 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 MOSPD1Q9UJG1 213 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 MFHAS1Q9Y4C4 1052 aa20.45■□□□□ 0.86
SQSTM1-215ENST00000514093 LRIG2O94898 1065 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 CDH5P33151 784 aaPredicted RBP20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 UGT1A3P35503 534 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 MTM1Q13496 603 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 HIST2H2BCQ6DN03 193 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 FAM71AQ8IYT1 594 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 CCDC74BQ96LY2 380 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 PSMG3-AS1Q96PY0 264 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 B3GNT4Q9C0J1 378 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 SUDS3Q9H7L9 328 aaPredicted RBP20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 CYP4F12Q9HCS2 524 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 METTL5Q9NRN9 209 aaKnown RBP20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 SPATS2LQ9NUQ6 558 aaKnown RBP20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 PLAAQ9Y263 795 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 ANKRD36A6QL64 1941 aa20.44■□□□□ 0.86
SQSTM1-215ENST00000514093 IGHV5-10-1A0A0J9YXX1 117 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 BLACEA4D250 179 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 CACNB4O00305 520 aaPredicted RBP20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 NKX2-8O15522 239 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 PLEKP08567 350 aaPredicted RBP20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 MPSTP25325 297 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 NRG1Q02297 640 aaPredicted RBP20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 ZSWIM9Q86XI8 627 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 FAM26EQ8N5C1 309 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 CPA5Q8WXQ8 436 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 TBC1D31Q96DN5 1066 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 LGR4Q9BXB1 951 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 SUV39H2Q9H5I1 410 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 NOL6Q9H6R4 1146 aaKnown RBP20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 LHX3Q9UBR4 397 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 ANAPC2Q9UJX6 822 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 B3GALT1Q9Y5Z6 326 aa20.43■□□□□ 0.86
SQSTM1-215ENST00000514093 USP9YO00507 2555 aaPredicted RBP20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 ZSCAN5CA6NGD5 496 aaPredicted RBP20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 FGFR1OPO95684 399 aaKnown RBP20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 CYP11B1P15538 503 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 SUOXP51687 545 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 KIAA1024LP59773 190 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 AGERQ15109 404 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 CYTH1Q15438 398 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 NKAIN2Q5VXU1 208 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 ERAP2Q6P179 960 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 CACNA2D3Q8IZS8 1091 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 CCDC185Q8N715 623 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 ART4Q93070 314 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 TUBD1Q9UJT1 453 aa20.42■□□□□ 0.86
SQSTM1-215ENST00000514093 RHPN2P1A8MT19 583 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 BUB1BO60566 1050 aaPredicted RBP20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 PRKAR1AP10644 381 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 CD1CP29017 333 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 MMP12P39900 470 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 BPIFB4P59827 614 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 CCDC14Q49A88 953 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 INO80DQ53TQ3 878 aaPredicted RBP20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 PELI3Q8N2H9 469 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 C9orf43Q8TAL5 461 aaPredicted RBP20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 RXFP2Q8WXD0 754 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 CASKIN2Q8WXE0 1202 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 CDH19Q9H159 772 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 RETREG1Q9H6L5 497 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 PCDHGA3Q9Y5H0 932 aa20.41■□□□□ 0.86
SQSTM1-215ENST00000514093 ZNF891A8MT65 544 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 HGSO14964 777 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 DUX1O43812 170 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 RECQL5O94762 991 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 FGF1P05230 155 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 SERINC3Q13530 473 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 RAPGEF1Q13905 1077 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 CFAP58Q5T655 872 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 NAA35Q5VZE5 725 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 CAMK1DQ8IU85 385 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 PYROXD2Q8N2H3 581 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 KIAA1524Q8TCG1 905 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 GPT2Q8TD30 523 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 HCAR2Q8TDS4 363 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 GPBAR1Q8TDU6 330 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 ZDHHC1Q8WTX9 485 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 PATE1Q8WXA2 126 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 OCIAD1Q9NX40 245 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 SLC39A1Q9NY26 324 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 ATP8A1Q9Y2Q0 1164 aa20.4■□□□□ 0.86
SQSTM1-215ENST00000514093 ARHGEF17Q96PE2 2063 aaPredicted RBP20.39■□□□□ 0.86
SQSTM1-215ENST00000514093 TSPAN11A1L157 253 aa20.39■□□□□ 0.85
SQSTM1-215ENST00000514093 GTPBP10A4D1E9 387 aaKnown RBP20.39■□□□□ 0.85
SQSTM1-215ENST00000514093 A8MX80 341 aa20.39■□□□□ 0.85
SQSTM1-215ENST00000514093 TEX33O43247 280 aa20.39■□□□□ 0.85
SQSTM1-215ENST00000514093 RAD1O60671 282 aa20.39■□□□□ 0.85
SQSTM1-215ENST00000514093 ECEL1O95672 775 aa20.39■□□□□ 0.85
SQSTM1-215ENST00000514093 C17orf82Q86X59 251 aaPredicted RBP20.39■□□□□ 0.85
SQSTM1-215ENST00000514093 DNAAF5Q86Y56 855 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms