RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ELF1P32519 619 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 RAP1GDS1P52306 607 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 PABPC1LQ4VXU2 614 aaKnown RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 INO80DQ53TQ3 878 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 ITIH5Q86UX2 942 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 MRPL17Q9NRX2 175 aaKnown RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 PLA2G4CQ9UP65 541 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 CCDC162PA2VCL2 907 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 KIAA0355O15063 1070 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 PEX11AO75192 247 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 ENO1P06733 434 aaKnown RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 CHRNGP07510 517 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 GM2AP17900 193 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 FDXRP22570 491 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 ITGB8P26012 769 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 RPL14P50914 215 aaKnown RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 USP4Q13107 963 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 UBAP2LQ14157 1087 aaKnown RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 ACAP2Q15057 778 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 ARL13AQ5H913 290 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 RNF219Q5W0B1 726 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 MRNIPQ6NTE8 343 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 PIWIL4Q7Z3Z4 852 aaKnown RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 TMC7Q7Z402 723 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 TMCO2Q7Z6W1 182 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 BLOC1S5Q8TDH9 187 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 CCDC126Q96EE4 140 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 NDNQ99608 321 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 DENND2DQ9H6A0 471 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-208ENST00000507823 VTI1BQ9UEU0 232 aa17.72■□□□□ 0.43
SFXN1-208ENST00000507823 SPECC1L-ADORA2AF8WAN1 911 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 HDAC3O15379 428 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 CD3EAPO15446 510 aaKnown RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 TEX28O15482 410 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 CRTAMO95727 393 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 GLP2RO95838 553 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 PENKP01210 267 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 RBP1P09455 135 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 MBL2P11226 248 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 PRDX6P30041 224 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 NAGLUP54802 743 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 TAF1AQ15573 450 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 ENDOVQ8N8Q3 282 aaKnown RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 TXNDC5Q8NBS9 432 aaKnown RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 MAPK15Q8TD08 544 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 ANKRD36A6QL64 1941 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 B2RBV5 119 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 BAIAP3O94812 1187 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 IRF1P10914 325 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 CDKN2DP55273 166 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 SMAD3P84022 425 aaKnown RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 TIAL1Q01085 375 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■■■■□ 21.3
SFXN1-208ENST00000507823 RALGPS1Q5JS13 557 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 ZNF784Q8NCA9 323 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 HJURPQ8NCD3 748 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-208ENST00000507823 ALG14Q96F25 216 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 CDKN2AIPNLQ96HQ2 116 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 ZBP1Q9H171 429 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 EBF2Q9HAK2 575 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 SCUBE2Q9NQ36 999 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 SPO11Q9Y5K1 396 aa17.71■□□□□ 0.43
SFXN1-208ENST00000507823 OR51F1A6NGY5 319 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 CCL22O00626 93 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 GRID2O43424 1007 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 TSPAN3O60637 253 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 PIGNO95427 931 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 MPSTP25325 297 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 LRRC26Q2I0M4 334 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 PREPLQ4J6C6 727 aaPredicted RBP17.7■□□□□ 0.42
SFXN1-208ENST00000507823 DNAL1Q4LDG9 190 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 VWA5B1Q5TIE3 1220 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 ICE2Q659A1 982 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 ZNF549Q6P9A3 640 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 TMEM207Q6UWW9 146 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 RBM15BQ8NDT2 890 aaKnown RBP17.7■□□□□ 0.42
SFXN1-208ENST00000507823 OR13C4Q8NGS5 318 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 OR4L1Q8NH43 312 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 SLC22A12Q96S37 553 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 RNPEPL1Q9HAU8 725 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 GPAMQ9HCL2 828 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 TRPC7Q9HCX4 862 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 INTS10Q9NVR2 710 aaKnown RBP17.7■□□□□ 0.42
SFXN1-208ENST00000507823 TRIM43BA6NCK2 446 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 C1RP00736 705 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 LINC00271P0C7V0 271 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 TFEBP19484 476 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 CPOXP36551 454 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 ZXDBP98169 803 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 CSHL1Q14406 222 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 SEMA3AQ14563 771 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 SLC9B1Q4ZJI4 515 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 NCEH1Q6PIU2 408 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 ARHGAP24Q8N264 748 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 AUTS2Q8WXX7 1259 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 TRIM43Q96BQ3 446 aaPredicted RBP17.7■□□□□ 0.42
SFXN1-208ENST00000507823 CNDP1Q96KN2 507 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 LRRC3Q9BY71 257 aa17.7■□□□□ 0.42
SFXN1-208ENST00000507823 SUDS3Q9H7L9 328 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms