RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 INSCQ1MX18 579 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 ZNF697Q5TEC3 545 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 NAPRTQ6XQN6 538 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 RAPH1Q70E73 1250 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 MFN1Q8IWA4 741 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 HJURPQ8NCD3 748 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 BRSK1Q8TDC3 778 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 KCTD4Q8WVF5 259 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 ERP27Q96DN0 273 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 PRR11Q96HE9 360 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 GPR78Q96P69 363 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 DDX50Q9BQ39 737 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 MYLK2Q9H1R3 596 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 ASAH2Q9NR71 780 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 LHX3Q9UBR4 397 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 INTS6Q9UL03 887 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 DENND4CQ5VZ89 1909 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 TRAV19A0A0A6YYK7 116 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 CCDC162PA2VCL2 907 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 FSBPO95073 299 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 S1PR4O95977 384 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 MPOP05164 745 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 FGF1P05230 155 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 CA3P07451 260 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 GKP32189 559 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 CD70P32970 193 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 LEPRP48357 1165 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 ACVR1Q04771 509 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 BNIP1Q12981 228 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 ITGA9Q13797 1035 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 RFTN1Q14699 578 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 TEAD2Q15562 447 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 PPM1LQ5SGD2 360 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 NLRP9Q7RTR0 991 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 ARID3BQ8IVW6 561 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 CMTM8Q8IZV2 173 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 OR6Y1Q8NGX8 325 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 PDCD6IPQ8WUM4 868 aaKnown RBP8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 VOPP1Q96AW1 172 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 RMDN1Q96DB5 314 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 ZSWIM3Q96MP5 696 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 C7orf26Q96N11 449 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 EMILIN2Q9BXX0 1053 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 TM6SF2Q9BZW4 377 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 NMRAL1Q9HBL8 299 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 SCUBE2Q9NQ36 999 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 MAN1C1Q9NR34 630 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 TRIM33Q9UPN9 1127 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 CRYL1Q9Y2S2 319 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 RAI2Q9Y5P3 530 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 USH1CQ9Y6N9 552 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 CAPN7Q9Y6W3 813 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 NOTCH4Q99466 2003 aa8.88□□□□□ -0.99
CDC42SE1-204ENST00000483763 SLC7A4O43246 635 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 ZNF821O75541 412 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TGDSO95455 350 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 GOT2P00505 430 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 IL1BP01584 269 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 SLC4A1P02730 911 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 RHOP08100 348 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 MYL2P10916 166 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CPA3P15088 417 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CDC25CP30307 473 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CD151P48509 253 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 RAB10P61026 200 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 PRAMEP78395 509 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 LMAN2Q12907 356 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 STX3Q13277 289 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CBX2Q14781 532 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CCDC85BQ15834 202 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 UGP2Q16851 508 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 GPR158Q5T848 1215 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 MTDHQ86UE4 582 aaKnown RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TMEM25Q86YD3 366 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 BBS5Q8N3I7 341 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 FSTL5Q8N475 847 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 LPCAT1Q8NF37 534 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 MYLIPQ8WY64 445 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 USP13Q92995 863 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 NXNL1Q96CM4 212 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 EID2BQ96D98 161 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 ELMO2Q96JJ3 720 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 LRRC37BQ96QE4 947 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 NUDCD1Q96RS6 583 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 SORT1Q99523 831 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 FAM167BQ9BTA0 163 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TRIM55Q9BYV6 548 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 HAUS2Q9NVX0 235 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 NSMCE4AQ9NXX6 385 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 LZTS1Q9Y250 596 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 RWDD3Q9Y3V2 267 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 ANKRD66B4E2M5 251 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 TARM1B6A8C7 271 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 T-ENOLP0DO92 83 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 STMN1P16949 149 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 HLA-FP30511 346 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CTSOP43234 321 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CDKN1CP49918 316 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 EPHA5P54756 1037 aa8.87□□□□□ -0.99
CDC42SE1-204ENST00000483763 CDKN2DP55273 166 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms