RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 LRRC14Q15048 493 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 EIF4HQ15056 248 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 GEN1Q17RS7 908 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 GAB4Q2WGN9 574 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 CARD16Q5EG05 197 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 TMEM215Q68D42 235 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 FSTL4Q6MZW2 842 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 VITQ6UXI7 678 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 CHRDL2Q6WN34 429 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 C12orf40Q86WS4 652 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 CAMK1DQ8IU85 385 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 NDUFAF2Q8N183 169 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 CPA6Q8N4T0 437 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 DCLK2Q8N568 766 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 NAT16Q8N8M0 369 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 GPR150Q8NGU9 434 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 OR6K2Q8NGY2 324 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 TCP10LQ8TDR4 215 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 PDCD6IPQ8WUM4 868 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 PIH1D2Q8WWB5 315 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 CKAP2Q8WWK9 683 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 SCG3Q8WXD2 468 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 VOPP1Q96AW1 172 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 ELSPBP1Q96BH3 223 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 ECHDC3Q96DC8 303 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 DNAJC1Q96KC8 554 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 CABS1Q96KC9 395 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 MRGPRX3Q96LB0 322 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 MAGEB18Q96M61 343 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 ZNF641Q96N77 438 aaPredicted RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 SRPK1Q96SB4 655 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 CPEB1Q9BZB8 566 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 IQCGQ9H095 443 aaKnown RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 EBF3Q9H4W6 596 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 MAGEE1Q9HCI5 957 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 PCMTD2Q9NV79 361 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 POLR3BQ9NW08 1133 aaPredicted RBP9.42□□□□□ -0.9
VPS52-216ENST00000471309 ZNF711Q9Y462 761 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 KCTD3Q9Y597 815 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 ARL5AQ9Y689 179 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 SCN8AQ9UQD0 1980 aa9.42□□□□□ -0.9
VPS52-216ENST00000471309 CHD9Q3L8U1 2897 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 A0A0J9YYE9 177 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 A0A1W2PPC1 479 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 A0A1W2PQ67 120 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 GMNCA6NCL1 334 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 CAPN8A6NHC0 703 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 GLRA3O75311 464 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 PIGNO95427 931 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 POP4O95707 220 aaKnown RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 FAM107AO95990 144 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 TRBC1P01850 177 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 MPOP05164 745 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 ATP5BP06576 529 aaKnown RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 DLDP09622 509 aaKnown RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 PIRTP0C851 137 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 DHRS4L1P0CG22 281 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 POU3F3P20264 500 aaPredicted RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 LPOP22079 712 aaPredicted RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 GABRB3P28472 473 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 TYK2P29597 1187 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 SLC8A1P32418 973 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 NNMTP40261 264 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 ETV4P43268 484 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 LEPRP48357 1165 aaKnown RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 CD151P48509 253 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 CCT5P48643 541 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 MPP1Q00013 466 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 PDE1CQ14123 709 aaPredicted RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 DLG2Q15700 870 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 SEPT7Q16181 437 aaKnown RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 PDK4Q16654 411 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 MYLK3Q32MK0 819 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 LRIT3Q3SXY7 679 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 HHATQ5VTY9 493 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 GRAMD4Q6IC98 578 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 TANGO2Q6ICL3 276 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 LVRNQ6Q4G3 990 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 AFTPHQ6ULP2 937 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 RGS9BPQ6ZS82 235 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 CDHR3Q6ZTQ4 885 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 Q6ZVU0 165 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 LCA5Q86VQ0 697 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 CILP2Q8IUL8 1156 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 MFSD6LQ8IWD5 586 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 DENND6AQ8IWF6 608 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 RYBPQ8N488 228 aaPredicted RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 TTC30BQ8N4P2 665 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 KDM1BQ8NB78 822 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 MDGA1Q8NFP4 955 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 OR13C4Q8NGS5 318 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 OR6P1Q8NGX9 317 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 GDAP1Q8TB36 358 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 FRS2Q8WU20 508 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 HDAC10Q969S8 669 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 CHMP6Q96FZ7 201 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 ZFYVE19Q96K21 471 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 ZNF317Q96PQ6 595 aaPredicted RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 MYADMQ96S97 322 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 ECT2Q9H8V3 914 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms