RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 TTLL13PA6NNM8 815 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 OTCP00480 354 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 URODP06132 367 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 PABPC1P11940 636 aaKnown RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 AKR1A1P14550 325 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ATP5C1P36542 298 aaKnown RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 PRKD1Q15139 912 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 TMEM63BQ5T3F8 832 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 TXNRD3NBQ6F5E7 133 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 PPP4R4Q6NUP7 873 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ZYG11AQ6WRX3 759 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 OTOP3Q7RTS5 596 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 SPPL2CQ8IUH8 684 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 POC5Q8NA72 575 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 GLIS1Q8NBF1 620 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 CMASQ8NFW8 434 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 OR4L1Q8NH43 312 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 C19orf60Q96EN9 201 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 KLHL5Q96PQ7 755 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 EPB41L1Q9H4G0 881 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 NKX1-2Q9UD57 310 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 RPS6KA6Q9UK32 745 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ADAM30Q9UKF2 790 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 FAM208AQ9UK61 1670 aaKnown RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 KIF1AQ12756 1690 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 A8MX80 341 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 VNN1O95497 513 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 CDH3P22223 829 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 HOXD13P35453 343 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 EPHB3P54753 998 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 GSCP56915 257 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ARHGAP15Q53QZ3 475 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ERAP2Q6P179 960 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 DCLRE1AQ6PJP8 1040 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 CPSF7Q8N684 471 aaKnown RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 UBR7Q8N806 425 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 NIPA2Q8N8Q9 360 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ENKURQ8TC29 256 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 NDRG1Q92597 394 aaKnown RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF516Q92618 1163 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 EZH1Q92800 747 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 EXOC2Q96KP1 924 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 GOLGA2P5Q9HBQ8 144 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 GBA2Q9HCG7 927 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-203ENST00000375274 KLHL28Q9NXS3 571 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 DNAJB4Q9UDY4 337 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 MAGEL2Q9UJ55 1249 aa11.58□□□□□ -0.56
PTCH1-203ENST00000375274 FAM25AB3EWG3 89 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 FAM25CB3EWG5 89 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 FAM25GB3EWG6 89 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 MYL12BO14950 172 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 IGSF6O95976 241 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 KLRC2P26717 231 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 ABL2P42684 1182 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 NRLP54845 237 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 GRIK3Q13003 919 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 PSMD5Q16401 504 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 GPR180Q86V85 440 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 PYROXD2Q8N2H3 581 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 RHOBTB2Q9BYZ6 727 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 PDGFDQ9GZP0 370 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 DTLQ9NZJ0 730 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 SNX6Q9UNH7 406 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 SMIM28A0A1B0GU29 152 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 METTL18O95568 372 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 SMIM10L2AP0DMW4 78 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 SMIM10L2BP0DMW5 78 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 LPOP22079 712 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 GRK3P35626 688 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 RFX3P48380 749 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 INTS11Q5TA45 600 aaKnown RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 C16orf59Q7L2K0 433 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 TRMT11Q7Z4G4 463 aaKnown RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 OFCC1Q8IZS5 231 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 CBR4Q8N4T8 237 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 FAM156AQ8NDB6 213 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 OR2T12Q8NG77 320 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 PSMA8Q8TAA3 256 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 C8orf4Q9NR00 106 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 PIPSLA2A3N6 862 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 UGT1A9O60656 530 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 TSC22D2O75157 780 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 DBTP11182 482 aaKnown RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 TCF4P15884 667 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 MYL12AP19105 171 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 TUFMP49411 452 aaKnown RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 CPSF6Q16630 551 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 HECTD2Q5U5R9 776 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 FSTL5Q8N475 847 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-203ENST00000375274 CCDC185Q8N715 623 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF614Q8N883 585 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 DCAKDQ8WVC6 231 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 SEPT8Q92599 483 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 FBXL18Q96ME1 805 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 PPM1MQ96MI6 270 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 UGT1A7Q9HAW7 530 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 UGT1A10Q9HAW8 530 aa11.57□□□□□ -0.56
PTCH1-203ENST00000375274 UGT1A8Q9HAW9 530 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms