RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 LMNTD2Q8IXW0 634 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 BRSK1Q8TDC3 778 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 HEXDCQ8WVB3 486 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 TSPAN17Q96FV3 270 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 DNAJC1Q96KC8 554 aaKnown RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 BEGAINQ9BUH8 593 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 HERC2P3Q9BVR0 1158 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 KLF16Q9BXK1 252 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 MUC3BQ9H195 1237 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 SUDS3Q9H7L9 328 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 GPAMQ9HCL2 828 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 MARCH4Q9P2E8 410 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 LTBP2Q14767 1821 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 SPECC1L-ADORA2AF8WAN1 911 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 DLX3O60479 287 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 NDST3O95803 873 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 MBL2P11226 248 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 MYL4P12829 197 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 AOC1P19801 751 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 RGRP47804 291 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 PPP3CCP48454 512 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 RAB33AQ14088 237 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 PTPRCAPQ14761 206 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 FAM83EQ2M2I3 478 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 HECTD2Q5U5R9 776 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 C1orf53Q5VUE5 145 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 DNAJB7Q7Z6W7 309 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 GALNT7Q86SF2 657 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 TMPRSS6Q8IU80 811 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 WBP2Q969T9 261 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 SGF29Q96ES7 293 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 NUDCD1Q96RS6 583 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 MRPL57Q9BQC6 102 aaKnown RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 DENND2DQ9H6A0 471 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 TRPC7Q9HCX4 862 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.12□□□□□ -0.15
VPS33B-208ENST00000574755 RAP2CQ9Y3L5 183 aa14.12□□□□□ -0.15
VPS33B-208ENST00000574755 ABHD14A-ACY1A0A1B0GW23 586 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 SCAMP3O14828 347 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 PIGNO95427 931 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 GLP2RO95838 553 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 C1RP00736 705 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 CLTBP09497 229 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 LAG3P18627 525 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 NCF2P19878 526 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 MPSTP25325 297 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 CCR10P46092 362 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 EPHB3P54753 998 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 MXRA7P84157 204 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 ASPHQ12797 758 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 RFTN1Q14699 578 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 ARL13AQ5H913 290 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 RNF219Q5W0B1 726 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 TMC7Q7Z402 723 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 OR13C4Q8NGS5 318 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 SCG3Q8WXD2 468 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 PEX13Q92968 403 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 RMDN1Q96DB5 314 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 CYP2S1Q96SQ9 504 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 DDX50Q9BQ39 737 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 MAN1C1Q9NR34 630 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 SPG21Q9NZD8 308 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 TBC1D30Q9Y2I9 924 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 CRYL1Q9Y2S2 319 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 VWA7Q9Y334 891 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 PLXNA4Q9HCM2 1894 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 INSIG1O15503 277 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 S1PR4O95977 384 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 GOT2P00505 430 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 CCDC166P0CW27 439 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 EZRP15311 586 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 RFC2P35250 354 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 RPL14P50914 215 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 SMAD3P84022 425 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 ACVR1Q04771 509 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 WASHC2DQ5SRD0 308 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 AGAP9Q5VTM2 703 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 KLC3Q6P597 504 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 EPGNQ6UW88 154 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 HERC6Q8IVU3 1022 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 ARHGAP24Q8N264 748 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 CCNYL1Q8N7R7 359 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 RBM15BQ8NDT2 890 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 FBXO27Q8NI29 283 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 TRIB3Q96RU7 358 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 CRISPLD2Q9H0B8 497 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 SCUBE2Q9NQ36 999 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 IGSF5Q9NSI5 407 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 RPL26L1Q9UNX3 145 aaKnown RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.11□□□□□ -0.15
VPS33B-208ENST00000574755 INSL5Q9Y5Q6 135 aa14.11□□□□□ -0.15
VPS33B-208ENST00000574755 CD3EAPO15446 510 aaKnown RBP14.1□□□□□ -0.15
VPS33B-208ENST00000574755 ENTPD5O75356 428 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 RPP40O75818 363 aaKnown RBP14.1□□□□□ -0.15
VPS33B-208ENST00000574755 LTA4HP09960 611 aaKnown RBP14.1□□□□□ -0.15
VPS33B-208ENST00000574755 GM2AP17900 193 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 CA8P35219 290 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 SLC9B1Q4ZJI4 515 aa14.1□□□□□ -0.15
VPS33B-208ENST00000574755 CXorf57Q6NSI4 855 aaKnown RBP14.1□□□□□ -0.15
VPS33B-208ENST00000574755 MRNIPQ6NTE8 343 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms