RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 CCDC195A0A1B0GUA6 201 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 ARHGEF37A1IGU5 675 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 WDR27A2RRH5 827 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 B5MCH6 92 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 PDXKO00764 312 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 HOXC11O43248 304 aaPredicted RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 SEMA7AO75326 666 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 KIF20AO95235 890 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 ITGB3P05106 788 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 C8AP07357 584 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 TMEM191BP0C7N4 346 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 ZNF888P0CJ79 500 aaPredicted RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 TYMPP19971 482 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 CAPN3P20807 821 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 HOXA9P31269 272 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 PNPLA4P41247 253 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 PAPOLAP51003 745 aaKnown RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 EPHB3P54753 998 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 CLRN1P58418 232 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 YWHAHQ04917 246 aaPredicted RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 CYP24A1Q07973 514 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 TCF15Q12870 199 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 WDR49Q8IV35 697 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 GUF1Q8N442 669 aaKnown RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 CXorf38Q8TB03 319 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 SLC35B2Q8TB61 432 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 TMEM174Q8WUU8 243 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 HDAC2Q92769 488 aaKnown RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 ZNF707Q96C28 371 aaPredicted RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 ANKRD36BP1Q96IX9 119 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 FAM84AQ96KN4 292 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 RPL10LQ96L21 214 aaKnown RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 PPP1R9BQ96SB3 815 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 DDX23Q9BUQ8 820 aaKnown RBP10.29□□□□□ -0.76
MARK3-213ENST00000558611 INTS13Q9NVM9 706 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 DMAC2Q9NW81 257 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 SLC45A2Q9UMX9 530 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 NR2E1Q9Y466 385 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 MYO16Q9Y6X6 1858 aa10.29□□□□□ -0.76
MARK3-213ENST00000558611 TECTAO75443 2155 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 KMT2EQ8IZD2 1858 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 LOC102723971A0A1B0GUV8 181 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 EXOC3O60645 756 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 SOAT2O75908 522 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 OAZ2O95190 189 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 TNNC2P02585 160 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 PLA2G1BP04054 148 aaKnown RBP10.28□□□□□ -0.76
MARK3-213ENST00000558611 HNRNPA1P09651 372 aaKnown RBP eCLIP10.28□□□□□ -0.76
MARK3-213ENST00000558611 SP100P23497 879 aaPredicted RBP10.28□□□□□ -0.76
MARK3-213ENST00000558611 KRT9P35527 623 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 VIPR2P41587 438 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 NFYCQ13952 458 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 ARHGEF7Q14155 803 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 PSMD6Q15008 389 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 PPM1LQ5SGD2 360 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 TPGS2Q68CL5 300 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 CFAP161Q6P656 301 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 ZDHHC24Q6UX98 284 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 LRRC52Q8N7C0 313 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 CCDC89Q8N998 374 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 PCYOX1LQ8NBM8 494 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 OR5B17Q8NGF7 314 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 ZNF461Q8TAF7 563 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 SPATA20Q8TB22 786 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 UBE2Q2Q8WVN8 375 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 THAP4Q8WY91 577 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 SMG7Q92540 1137 aaKnown RBP10.28□□□□□ -0.76
MARK3-213ENST00000558611 RPGRIP1Q96KN7 1286 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 GSDMAQ96QA5 445 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 FNBP1Q96RU3 617 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 GPHA2Q96T91 129 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 TMEM168Q9H0V1 697 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 PCDHAC1Q9H158 963 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 EPB41L4BQ9H329 900 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 BARX1Q9HBU1 254 aaPredicted RBP10.28□□□□□ -0.76
MARK3-213ENST00000558611 RMND1Q9NWS8 449 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 NCDNQ9UBB6 729 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 SIX4Q9UIU6 781 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 HOOK1Q9UJC3 728 aaKnown RBP10.28□□□□□ -0.76
MARK3-213ENST00000558611 ADAM29Q9UKF5 820 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 AGAP1Q9UPQ3 857 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 MTO1Q9Y2Z2 717 aaKnown RBP10.28□□□□□ -0.76
MARK3-213ENST00000558611 CLUHO75153 1309 aa10.28□□□□□ -0.76
MARK3-213ENST00000558611 KIF26AQ9ULI4 1882 aaPredicted RBP10.27□□□□□ -0.76
MARK3-213ENST00000558611 OR6C75A6NL08 312 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 KPNA7A9QM74 516 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 B9A039 149 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 M0QYG6 137 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 CYB561D2O14569 222 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 CALUO43852 315 aaPredicted RBP10.27□□□□□ -0.77
MARK3-213ENST00000558611 KINO60870 393 aaKnown RBP10.27□□□□□ -0.77
MARK3-213ENST00000558611 SMC2O95347 1197 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 NR3C1P04150 777 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 KRT19P08727 400 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 DLATP10515 647 aaKnown RBP10.27□□□□□ -0.77
MARK3-213ENST00000558611 ARPP19P56211 112 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 BFSP1Q12934 665 aa10.27□□□□□ -0.77
MARK3-213ENST00000558611 PDE1CQ14123 709 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms