RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PSKH2Q96QS6 385 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 TUBGCP5Q96RT8 1024 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 WRAP53Q9BUR4 548 aaKnown RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 CINPQ9BW66 212 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 CALN1Q9BXU9 219 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 NHEJ1Q9H9Q4 299 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 PCDH12Q9NPG4 1184 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 ZNHIT6Q9NWK9 470 aaKnown RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 UCKL1Q9NWZ5 548 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 RCOR3Q9P2K3 495 aaPredicted RBP8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 SEPT3Q9UH03 358 aa8.86□□□□□ -0.99
SNRPA1-206ENST00000558059 SPTY2D1-AS1A0A0U1RR47 76 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 TTC24A2A3L6 582 aaPredicted RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 TRAFD1O14545 582 aaPredicted RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 FPGTO14772 594 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 PIAS2O75928 621 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 TM7SF2O76062 418 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 PRKCGP05129 697 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 TPM1P09493 284 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 CR2P20023 1033 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 XPAP23025 273 aaPredicted RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 MAN1A1P33908 653 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 IGFALSP35858 605 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 MMP12P39900 470 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 SSR1P43307 286 aaKnown RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 SCNN1BP51168 640 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 RENBPP51606 427 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 SEMG2Q02383 582 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 ELP6Q0PNE2 266 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 DPYSL3Q14195 570 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 KRT81Q14533 505 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 LBRQ14739 615 aaKnown RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 HADHQ16836 314 aaKnown RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 TSR1Q2NL82 804 aaKnown RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 ZNF542PQ5EBM4 170 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 SARM1Q6SZW1 724 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 NYAP1Q6ZVC0 841 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 MARCH9Q86YJ5 346 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 PGBD5Q8N414 524 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 TP53I13Q8NBR0 393 aaPredicted RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 PCDH19Q8TAB3 1148 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 SLC35G2Q8TBE7 412 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 CXorf40AQ8TE69 158 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 DEF6Q9H4E7 631 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 ATP13A3Q9H7F0 1226 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 MBNL1Q9NR56 388 aaKnown RBP8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 SPTLC3Q9NUV7 552 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 KLF15Q9UIH9 416 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 ATP8A1Q9Y2Q0 1164 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 COQ6Q9Y2Z9 468 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 PCDHGA1Q9Y5H4 931 aa8.85□□□□□ -0.99
SNRPA1-206ENST00000558059 LRP4O75096 1905 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 UNC13CQ8NB66 2214 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 AKR1B15C9JRZ8 316 aaPredicted RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 HTRA2O43464 458 aaPredicted RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 SIGLEC6O43699 453 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 MFSD11O43934 449 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 MTA2O94776 668 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 CSF2P04141 144 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 C1SP09871 688 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 C6P13671 934 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 NME1P15531 152 aaKnown RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 SERPINA4P29622 427 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 SERPINB6P35237 376 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 GJC1P36383 396 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 HSPA9P38646 679 aaKnown RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 ACADVLP49748 655 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 LIG3P49916 1009 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 AP1S1P61966 158 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 HNRNPKP61978 463 aaKnown RBP eCLIP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 BCL2L1Q07817 233 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 GALNT2Q10471 571 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 RALGDSQ12967 914 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 EIF2B5Q13144 721 aaKnown RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 ZNF211Q13398 564 aaPredicted RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 PDE1CQ14123 709 aaPredicted RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 ZNF235Q14590 738 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 MESDQ14696 234 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 PAFAH1B3Q15102 231 aaKnown RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 AGERQ15109 404 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 PDK2Q15119 407 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 SMAD1Q15797 465 aaKnown RBP8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 WSCD2Q2TBF2 565 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 CCDC157Q569K6 752 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 ANKRD20A8PQ5CZ79 823 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 NCBP2-AS2Q69YL0 99 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 DHRS13Q6UX07 377 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 LRRC49Q8IUZ0 686 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 CNGA4Q8IV77 575 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 ATPAF2Q8N5M1 289 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 TEX26Q8N6G2 289 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 PQLC3Q8N755 202 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 TC2NQ8N9U0 490 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 KCTD6Q8NC69 237 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 OR4C6Q8NH72 309 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 RAPGEF5Q92565 580 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 FAF2Q96CS3 445 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 CCDC42Q96M95 316 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 NUDCD1Q96RS6 583 aa8.84□□□□□ -0.99
SNRPA1-206ENST00000558059 MGME1Q9BQP7 344 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms