RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 RALBP11234 206 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 GJA1P17302 382 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 EN2P19622 333 aaPredicted RBP20.52■□□□□ 0.88
DDX55-205ENST00000538744 ILF2Q12905 390 aaKnown RBP20.52■□□□□ 0.88
DDX55-205ENST00000538744 MPPE1Q53F39 396 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 CNSTQ6PJW8 725 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 RNF135Q8IUD6 432 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 BBS7Q8IWZ6 715 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 TNS4Q8IZW8 715 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 WFDC5Q8TCV5 224 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 DDI1Q8WTU0 396 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 RMDN1Q96DB5 314 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 RASSF4Q9H2L5 321 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 TASP1Q9H6P5 420 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 ZNF395Q9H8N7 513 aaPredicted RBP20.52■□□□□ 0.88
DDX55-205ENST00000538744 KCNK4Q9NYG8 393 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 VPS51Q9UID3 782 aa20.52■□□□□ 0.88
DDX55-205ENST00000538744 A0A087X1B8 175 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 CSPG5O95196 566 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 SLC1A6P48664 564 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 NCALDP61601 193 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 SPDYAQ5MJ70 313 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 RTL10Q7L3V2 364 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 ARID3BQ8IVW6 561 aaPredicted RBP20.51■□□□□ 0.87
DDX55-205ENST00000538744 CEP97Q8IW35 865 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 ALG14Q96F25 216 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 DNAJC1Q96KC8 554 aaKnown RBP20.51■□□□□ 0.87
DDX55-205ENST00000538744 C20orf27Q9GZN8 174 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 TLR9Q9NR96 1032 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 LHX3Q9UBR4 397 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 RWDD3Q9Y3V2 267 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 RAI2Q9Y5P3 530 aa20.51■□□□□ 0.87
DDX55-205ENST00000538744 G3V2L1 256 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 LEFTY2O00292 366 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 CCL22O00626 93 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 AURKAO14965 403 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 FGF19O95750 216 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 PIRTP0C851 137 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 MYL2P10916 166 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 SKIV2L2P42285 1042 aaKnown RBP20.5■□□□□ 0.87
DDX55-205ENST00000538744 CLCN4P51793 760 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 TAS2R39P59534 338 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 MPP7Q5T2T1 576 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 SPPL3Q8TCT6 385 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 KCTD4Q8WVF5 259 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 POF1BQ8WVV4 589 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 BHMTQ93088 406 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 TSPAN17Q96FV3 270 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 TBATAQ96M53 351 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 C2orf49Q9BVC5 232 aaPredicted RBP20.5■□□□□ 0.87
DDX55-205ENST00000538744 SLC46A2Q9BY10 475 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 ADGRE3Q9BY15 652 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 TXLNGQ9NUQ3 528 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.5■□□□□ 0.87
DDX55-205ENST00000538744 DNMT3BQ9UBC3 853 aaKnown RBP20.5■□□□□ 0.87
DDX55-205ENST00000538744 HEY2Q9UBP5 337 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 ZFP69BQ9UJL9 534 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 RUVBL2Q9Y230 463 aaKnown RBP20.5■□□□□ 0.87
DDX55-205ENST00000538744 H2AFYO75367 372 aaKnown RBP20.5■□□□□ 0.87
DDX55-205ENST00000538744 GLP2RO95838 553 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 RHOAP61586 193 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 UBE3AQ05086 875 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 ITGA9Q13797 1035 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 TSNAXIP1Q2TAA8 658 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 ZNF789Q5FWF6 425 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 RALGPS1Q5JS13 557 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 C7orf61Q8IZ16 206 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 CENPLQ8N0S6 344 aaPredicted RBP20.5■□□□□ 0.87
DDX55-205ENST00000538744 GPR150Q8NGU9 434 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 PPP4R1Q8TF05 950 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 SCYL1Q96KG9 808 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 OMDQ99983 421 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 ARHGAP26Q9UNA1 814 aa20.5■□□□□ 0.87
DDX55-205ENST00000538744 NRG2O14511 850 aaPredicted RBP20.49■□□□□ 0.87
DDX55-205ENST00000538744 ITM2AO43736 263 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 ATP5HO75947 161 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 S1PR4O95977 384 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 GOT2P00505 430 aaKnown RBP20.49■□□□□ 0.87
DDX55-205ENST00000538744 PRLP01236 227 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 DDX6P26196 483 aaKnown RBP eCLIP20.49■□□□□ 0.87
DDX55-205ENST00000538744 KPNA2P52292 529 aaKnown RBP20.49■□□□□ 0.87
DDX55-205ENST00000538744 EPHA5P54756 1037 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 ZNF460Q14592 562 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 TAF1AQ15573 450 aaPredicted RBP20.49■□□□□ 0.87
DDX55-205ENST00000538744 RBM20Q5T481 1227 aaKnown RBP20.49■□□□□ 0.87
DDX55-205ENST00000538744 MRNIPQ6NTE8 343 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 RETSATQ6NUM9 610 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 NCEH1Q6PIU2 408 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 ZYG11AQ6WRX3 759 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 MTDHQ86UE4 582 aaKnown RBP20.49■□□□□ 0.87
DDX55-205ENST00000538744 LPCAT1Q8NF37 534 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 OR13C4Q8NGS5 318 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 OR6Y1Q8NGX8 325 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 SIKE1Q9BRV8 207 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 NLE1Q9NVX2 485 aaPredicted RBP20.49■□□□□ 0.87
DDX55-205ENST00000538744 HCFC1R1Q9NWW0 138 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 MARCH4Q9P2E8 410 aaPredicted RBP20.49■□□□□ 0.87
DDX55-205ENST00000538744 PCDHGC4Q9Y5F7 938 aa20.49■□□□□ 0.87
DDX55-205ENST00000538744 SPO11Q9Y5K1 396 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms