RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 PCID2Q5JVF3 399 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF484Q5JVG2 852 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANKRD20A2Q5SQ80 823 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 WASHC2DQ5SRD0 308 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SPATA46Q5T0L3 261 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SPOUT1Q5T280 376 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 MPP7Q5T2T1 576 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC183Q5T5S1 534 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANKRD20A1Q5TYW2 823 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 MANEALQ5VSG8 457 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 PRAMEF17Q5VTA0 474 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 DCAF12L1Q5VU92 463 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SFMBT2Q5VUG0 894 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANKRD20A3Q5VUR7 823 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SHEQ5VZ18 495 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM160B1Q5W0V3 765 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 PAPD7Q5XG87 772 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADALQ6DHV7 355 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 FCRL6Q6DN72 434 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ABLIM2Q6H8Q1 611 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 JADE1Q6IE81 842 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CAPRIN2Q6IMN6 1127 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ETFRF1Q6IPR1 90 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF425Q6IV72 752 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 HEPHL1Q6MZM0 1159 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC18B1Q6NT16 456 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CAVIN1Q6NZI2 390 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CDC73Q6P1J9 531 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF529Q6P280 563 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 WDR93Q6P2C0 686 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 NEK5Q6P3R8 708 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 MTFR2Q6P444 385 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 VWA1Q6PCB0 445 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 PSRC1Q6PGN9 363 aaPredicted RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SHQ1Q6PI26 577 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMEM65Q6PI78 240 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRAT1Q6PIZ9 186 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SHC4Q6S5L8 630 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZDHHC24Q6UX98 284 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANGPTL8Q6UXH0 198 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCBE1Q6UXH8 406 aaPredicted RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ABHD15Q6UXT9 468 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIM72Q6ZMU5 477 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF788Q6ZQV5 615 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 C15orf39Q6ZRI6 1047 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 RGS9BPQ6ZS82 235 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 C15orf52Q6ZUT6 534 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 DENND5BQ6ZUT9 1274 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SEM1Q6ZVN7 128 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 PARS2Q7L3T8 475 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 LPCAT2Q7L5N7 544 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SYT13Q7L8C5 426 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 RRM2BQ7LG56 351 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 OTOAQ7RTW8 1153 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 GPRIN1Q7Z2K8 1008 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF572Q7Z3I7 529 aaPredicted RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CACNA2D4Q7Z3S7 1137 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADCK2Q7Z695 626 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 RABEPKQ7Z6M1 372 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 TAF8Q7Z7C8 310 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZER1Q7Z7L7 766 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 GPR149Q86SP6 731 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 USP37Q86T82 979 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRABD2AQ86V40 505 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 EXOC3L1Q86VI1 746 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMEM200AQ86VY9 491 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CEP57Q86XR8 500 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 DZIP1Q86YF9 867 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 P3H2Q8IVL5 708 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SFTPA1Q8IWL2 248 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARHGAP12Q8IWW6 846 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 MCEMP1Q8IX19 187 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 IQCF2Q8IXL9 164 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM217AQ8IXS0 508 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 C4orf19Q8IY42 314 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 TIGD4Q8IY51 512 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 PEX5LQ8IYB4 626 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM185AQ8N0U4 392 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SPARTQ8N0X7 666 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CNTROBQ8N137 903 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SIX6OS1Q8N1H7 587 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 LRRC43Q8N309 656 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 FSTL5Q8N475 847 aaPredicted RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZGPATQ8N5A5 531 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 MINDY1Q8N5J2 469 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 SIRT6Q8N6T7 355 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 CELF5Q8N6W0 485 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 Q8N9P0 234 aaPredicted RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 FAM71DQ8N9W8 422 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 PCSK9Q8NBP7 692 aaKnown RBP0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 ATAD1Q8NBU5 361 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 C11orf65Q8NCR3 313 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 MCUQ8NE86 351 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 Q8NFD4 153 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 IPMKQ8NFU5 416 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 FBXO18Q8NFZ0 1043 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 TSPAN14Q8NG11 270 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 LINS1Q8NG48 757 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 GPR150Q8NGU9 434 aa0.6□□□□□ -2.31
RNU4-54P-201ENST00000516428 RFWD2Q8NHY2 731 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms