RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ASB12Q8WXK4 309 aa14.14□□□□□ -0.15
TREX1-202ENST00000444177 LENG8Q96PV6 779 aaPredicted RBP14.14□□□□□ -0.15
TREX1-202ENST00000444177 KLF6Q99612 283 aaPredicted RBP14.14□□□□□ -0.15
TREX1-202ENST00000444177 GPR27Q9NS67 375 aa14.14□□□□□ -0.15
TREX1-202ENST00000444177 SEPT3Q9UH03 358 aa14.14□□□□□ -0.15
TREX1-202ENST00000444177 INTUQ9ULD6 942 aa14.14□□□□□ -0.15
TREX1-202ENST00000444177 IGSF10Q6WRI0 2623 aa14.14□□□□□ -0.15
TREX1-202ENST00000444177 FFAR2O15552 330 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 SPINT1O43278 529 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 MTA2O94776 668 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 MAP3K6O95382 1288 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 LCA5LO95447 670 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 IL4RP24394 825 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 SERPINA4P29622 427 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 ARHGAP25P42331 645 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 SLC10A7Q0GE19 358 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 FZD2Q14332 565 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 GRM3Q14832 879 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 HS1BP3Q53T59 392 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 ANKRD20A8PQ5CZ79 823 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 KYAT3Q6YP21 454 aaKnown RBP14.13□□□□□ -0.15
TREX1-202ENST00000444177 PTAR1Q7Z6K3 402 aaPredicted RBP14.13□□□□□ -0.15
TREX1-202ENST00000444177 SRLQ86TD4 932 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 TMTC1Q8IUR5 882 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 MAP7D3Q8IWC1 876 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 BBS5Q8N3I7 341 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 CXorf40AQ8TE69 158 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 HNRNPLLQ8WVV9 542 aaKnown RBP14.13□□□□□ -0.15
TREX1-202ENST00000444177 ZNF599Q96NL3 588 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 PSKH2Q96QS6 385 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 TUBGCP5Q96RT8 1024 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 CPEB1Q9BZB8 566 aaKnown RBP14.13□□□□□ -0.15
TREX1-202ENST00000444177 ATP13A3Q9H7F0 1226 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 DNAJC28Q9NX36 388 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 DKK3Q9UBP4 350 aa14.13□□□□□ -0.15
TREX1-202ENST00000444177 SPTY2D1-AS1A0A0U1RR47 76 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 LRRD1A4D1F6 860 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 NEMP2A6NFY4 417 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 SOWAHDA6NJG2 315 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 FPGTO14772 594 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 AREL1O15033 823 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 SCAMP1O15126 338 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 MUSKO15146 869 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 SPOPO43791 374 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 MAFKO60675 156 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 CSF2P04141 144 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 KRT1P04264 644 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 TNNT1P13805 278 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 NOP2P46087 812 aaKnown RBP14.12□□□□□ -0.15
TREX1-202ENST00000444177 RABIFP47224 123 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 CSNK1DP48730 415 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 RENBPP51606 427 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 HNRNPKP61978 463 aaKnown RBP eCLIP14.12□□□□□ -0.15
TREX1-202ENST00000444177 DAB2P98082 770 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 E2F1Q01094 437 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 INSM1Q01101 510 aaPredicted RBP14.12□□□□□ -0.15
TREX1-202ENST00000444177 BCL2L1Q07817 233 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 PAFAH1B3Q15102 231 aaKnown RBP14.12□□□□□ -0.15
TREX1-202ENST00000444177 SPA17Q15506 151 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 COL28A1Q2UY09 1125 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 ODF2Q5BJF6 829 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 CAMK1DQ8IU85 385 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 CACTIN-AS1Q8N1I8 211 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 PCDH19Q8TAB3 1148 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 ZNF641Q96N77 438 aaPredicted RBP14.12□□□□□ -0.15
TREX1-202ENST00000444177 WRAP53Q9BUR4 548 aaKnown RBP14.12□□□□□ -0.15
TREX1-202ENST00000444177 SUV39H2Q9H5I1 410 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 LUC7LQ9NQ29 371 aaKnown RBP14.12□□□□□ -0.15
TREX1-202ENST00000444177 HYOU1Q9Y4L1 999 aa14.12□□□□□ -0.15
TREX1-202ENST00000444177 ADAMTS20P59510 1910 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 TSPAN11A1L157 253 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 TTC24A2A3L6 582 aaPredicted RBP14.11□□□□□ -0.15
TREX1-202ENST00000444177 BUB1BO60566 1050 aaPredicted RBP14.11□□□□□ -0.15
TREX1-202ENST00000444177 MMP20O60882 483 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 PEX11BO96011 259 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 CKMT1AP12532 417 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 NME1P15531 152 aaKnown RBP14.11□□□□□ -0.15
TREX1-202ENST00000444177 TIMP2P16035 220 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 ITIH2P19823 946 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 KDELR1P24390 212 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 SLC1A1P43005 524 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 SCNN1BP51168 640 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 PFN3P60673 137 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 AP1S1P61966 158 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 ELP6Q0PNE2 266 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 GALNT2Q10471 571 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 PDE1CQ14123 709 aaPredicted RBP14.11□□□□□ -0.15
TREX1-202ENST00000444177 TPRG1LQ5T0D9 272 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 ERAP2Q6P179 960 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 BRAT1Q6PJG6 821 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 KDM7AQ6ZMT4 941 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 ZSWIM9Q86XI8 627 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 SPC24Q8NBT2 197 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.11□□□□□ -0.15
TREX1-202ENST00000444177 RAPGEF5Q92565 580 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 CENPTQ96BT3 561 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 FAF2Q96CS3 445 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 NXPE2Q96DL1 559 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 NRSN2Q9GZP1 204 aa14.11□□□□□ -0.15
TREX1-202ENST00000444177 SCUBE2Q9NQ36 999 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms