RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NAT16Q8N8M0 369 aa15.07■□□□□ 0
MKS1-202ENST00000393119 OR6P1Q8NGX9 317 aa15.07■□□□□ 0
MKS1-202ENST00000393119 FAM136AQ96C01 138 aa15.07■□□□□ 0
MKS1-202ENST00000393119 RMDN2Q96LZ7 410 aa15.07■□□□□ 0
MKS1-202ENST00000393119 MANSC1Q9H8J5 431 aa15.07■□□□□ 0
MKS1-202ENST00000393119 SCUBE2Q9NQ36 999 aa15.07■□□□□ 0
MKS1-202ENST00000393119 VPS45Q9NRW7 570 aa15.07■□□□□ 0
MKS1-202ENST00000393119 ABCF3Q9NUQ8 709 aa15.07■□□□□ 0
MKS1-202ENST00000393119 GPR39O43194 453 aa15.07■□□□□ 0
MKS1-202ENST00000393119 CEBPBP17676 345 aa15.07■□□□□ 0
MKS1-202ENST00000393119 CDC25CP30307 473 aa15.07■□□□□ 0
MKS1-202ENST00000393119 TRAF2Q12933 501 aa15.07■□□□□ 0
MKS1-202ENST00000393119 PDPK2PQ6A1A2 396 aa15.07■□□□□ 0
MKS1-202ENST00000393119 TIFABQ6ZNK6 161 aa15.07■□□□□ 0
MKS1-202ENST00000393119 GPR65Q8IYL9 337 aa15.07■□□□□ 0
MKS1-202ENST00000393119 HJURPQ8NCD3 748 aaPredicted RBP15.07■□□□□ 0
MKS1-202ENST00000393119 LPCAT1Q8NF37 534 aa15.07■□□□□ 0
MKS1-202ENST00000393119 MDGA1Q8NFP4 955 aa15.07■□□□□ 0
MKS1-202ENST00000393119 ALKBH8Q96BT7 664 aaKnown RBP15.07■□□□□ 0
MKS1-202ENST00000393119 RMDN1Q96DB5 314 aa15.07■□□□□ 0
MKS1-202ENST00000393119 MTBPQ96DY7 904 aa15.07■□□□□ 0
MKS1-202ENST00000393119 BPIFA1Q9NP55 256 aa15.07■□□□□ 0
MKS1-202ENST00000393119 LHX3Q9UBR4 397 aa15.07■□□□□ 0
MKS1-202ENST00000393119 LSM7Q9UK45 103 aaKnown RBP15.07■□□□□ 0
MKS1-202ENST00000393119 LZTS1Q9Y250 596 aa15.07■□□□□ 0
MKS1-202ENST00000393119 WNT6Q9Y6F9 365 aa15.07■□□□□ 0
MKS1-202ENST00000393119 NOTCH4Q99466 2003 aa15.07■□□□□ 0
MKS1-202ENST00000393119 CCT8L1PA6NM43 557 aa15.06■□□□□ 0
MKS1-202ENST00000393119 A8MX80 341 aa15.06■□□□□ 0
MKS1-202ENST00000393119 NEFHP12036 1026 aa15.06■□□□□ 0
MKS1-202ENST00000393119 ALADP13716 330 aa15.06■□□□□ 0
MKS1-202ENST00000393119 WEE1P30291 646 aa15.06■□□□□ 0
MKS1-202ENST00000393119 CRHR1P34998 444 aa15.06■□□□□ 0
MKS1-202ENST00000393119 ABL2P42684 1182 aa15.06■□□□□ 0
MKS1-202ENST00000393119 MAGEA10P43363 369 aaPredicted RBP15.06■□□□□ 0
MKS1-202ENST00000393119 CLNS1AP54105 237 aaKnown RBP15.06■□□□□ 0
MKS1-202ENST00000393119 GPM6BQ13491 265 aa15.06■□□□□ 0
MKS1-202ENST00000393119 SEMA3AQ14563 771 aa15.06■□□□□ 0
MKS1-202ENST00000393119 ACCSLQ4AC99 568 aa15.06■□□□□ 0
MKS1-202ENST00000393119 ACBD5Q5T8D3 534 aaPredicted RBP15.06■□□□□ 0
MKS1-202ENST00000393119 ZNF707Q96C28 371 aaPredicted RBP15.06■□□□□ 0
MKS1-202ENST00000393119 GCNAQ96QF7 691 aa15.06■□□□□ 0
MKS1-202ENST00000393119 ABCB8Q9NUT2 735 aa15.06■□□□□ 0
MKS1-202ENST00000393119 RAI2Q9Y5P3 530 aa15.06■□□□□ 0
MKS1-202ENST00000393119 PIGNO95427 931 aa15.06■□□□□ 0
MKS1-202ENST00000393119 C2P06681 752 aa15.06■□□□□ 0
MKS1-202ENST00000393119 PTPN2P17706 415 aa15.06■□□□□ 0
MKS1-202ENST00000393119 HLA-FP30511 346 aa15.06■□□□□ 0
MKS1-202ENST00000393119 GLRBP48167 497 aa15.06■□□□□ 0
MKS1-202ENST00000393119 CDKN1CP49918 316 aaPredicted RBP15.06■□□□□ 0
MKS1-202ENST00000393119 E2F5Q15329 346 aa15.06■□□□□ 0
MKS1-202ENST00000393119 FYB2Q5VWT5 728 aa15.06■□□□□ 0
MKS1-202ENST00000393119 NEPROQ6NW34 567 aa15.06■□□□□ 0
MKS1-202ENST00000393119 SPATA21Q7Z572 469 aa15.06■□□□□ 0
MKS1-202ENST00000393119 FAM217AQ8IXS0 508 aa15.06■□□□□ 0
MKS1-202ENST00000393119 EFHBQ8N7U6 833 aa15.06■□□□□ 0
MKS1-202ENST00000393119 CCDC197Q8NCU1 140 aa15.06■□□□□ 0
MKS1-202ENST00000393119 RFWD2Q8NHY2 731 aa15.06■□□□□ 0
MKS1-202ENST00000393119 CHD5Q8TDI0 1954 aa15.06■□□□□ 0
MKS1-202ENST00000393119 GDPD5Q8WTR4 605 aa15.06■□□□□ 0
MKS1-202ENST00000393119 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.06■□□□□ 0
MKS1-202ENST00000393119 CPSF2Q9P2I0 782 aaKnown RBP15.06■□□□□ 0
MKS1-202ENST00000393119 PRKAG3Q9UGI9 489 aa15.06■□□□□ 0
MKS1-202ENST00000393119 DCTN4Q9UJW0 460 aa15.06■□□□□ 0
MKS1-202ENST00000393119 MAFFQ9ULX9 164 aa15.06■□□□□ 0
MKS1-202ENST00000393119 NUMBLQ9Y6R0 609 aa15.06■□□□□ 0
MKS1-202ENST00000393119 A0A096LPK6 155 aa15.05■□□□□ 0
MKS1-202ENST00000393119 MROH6A6NGR9 719 aa15.05■□□□□ 0
MKS1-202ENST00000393119 NEDD8-MDP1E9PL57 170 aa15.05■□□□□ 0
MKS1-202ENST00000393119 EDF1O60869 148 aaKnown RBP15.05■□□□□ 0
MKS1-202ENST00000393119 CTPS1P17812 591 aa15.05■□□□□ 0
MKS1-202ENST00000393119 SPRP35270 261 aaPredicted RBP15.05■□□□□ 0
MKS1-202ENST00000393119 ITIH4Q14624 930 aa15.05■□□□□ 0
MKS1-202ENST00000393119 TRIM68Q6AZZ1 485 aa15.05■□□□□ 0
MKS1-202ENST00000393119 CAMK1DQ8IU85 385 aa15.05■□□□□ 0
MKS1-202ENST00000393119 VN1R2Q8NFZ6 395 aa15.05■□□□□ 0
MKS1-202ENST00000393119 ZNF599Q96NL3 588 aa15.05■□□□□ 0
MKS1-202ENST00000393119 DDX50Q9BQ39 737 aaKnown RBP15.05■□□□□ 0
MKS1-202ENST00000393119 TLE6Q9H808 572 aa15.05■□□□□ 0
MKS1-202ENST00000393119 NPHS2Q9NP85 383 aa15.05■□□□□ 0
MKS1-202ENST00000393119 EVLQ9UI08 416 aaPredicted RBP15.05■□□□□ 0
MKS1-202ENST00000393119 HEATR9A2RTY3 570 aa15.05■□□□□ -0
MKS1-202ENST00000393119 LYPLA1O75608 230 aaPredicted RBP15.05■□□□□ -0
MKS1-202ENST00000393119 ALPIP09923 528 aa15.05■□□□□ -0
MKS1-202ENST00000393119 RHOAP61586 193 aa15.05■□□□□ -0
MKS1-202ENST00000393119 MTA1Q13330 715 aa15.05■□□□□ -0
MKS1-202ENST00000393119 THOC5Q13769 683 aaKnown RBP15.05■□□□□ -0
MKS1-202ENST00000393119 USP10Q14694 798 aaKnown RBP15.05■□□□□ -0
MKS1-202ENST00000393119 CHI3L2Q15782 390 aa15.05■□□□□ -0
MKS1-202ENST00000393119 DGKKQ5KSL6 1271 aa15.05■□□□□ -0
MKS1-202ENST00000393119 FAM219BQ5XKK7 198 aa15.05■□□□□ -0
MKS1-202ENST00000393119 SORCS1Q8WY21 1168 aa15.05■□□□□ -0
MKS1-202ENST00000393119 RSPRY1Q96DX4 576 aa15.05■□□□□ -0
MKS1-202ENST00000393119 TDRD1Q9BXT4 1180 aaKnown RBP15.05■□□□□ -0
MKS1-202ENST00000393119 FAM96AQ9H5X1 160 aa15.05■□□□□ -0
MKS1-202ENST00000393119 TDP1Q9NUW8 608 aa15.05■□□□□ -0
MKS1-202ENST00000393119 FBXO5Q9UKT4 447 aa15.05■□□□□ -0
MKS1-202ENST00000393119 CRYL1Q9Y2S2 319 aa15.05■□□□□ -0
MKS1-202ENST00000393119 C5orf67F2Z3F1 127 aa15.04■□□□□ -0
MKS1-202ENST00000393119 ZNF821O75541 412 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms