RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 ZHX1Q9UKY1 873 aaPredicted RBP17.03■□□□□ 0.32
CNTNAP3B-215ENST00000619138 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
CNTNAP3B-215ENST00000619138 CHAMP1Q96JM3 812 aa17.02■□□□□ 0.32
CNTNAP3B-215ENST00000619138 ZFYVE9O95405 1425 aa17.01■□□□□ 0.31
CNTNAP3B-215ENST00000619138 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
CNTNAP3B-215ENST00000619138 ALKQ9UM73 1620 aa17.01■□□□□ 0.31
CNTNAP3B-215ENST00000619138 ADGRB1O14514 1584 aa17.01■□□□□ 0.31
CNTNAP3B-215ENST00000619138 NEURL4Q96JN8 1562 aa17.01■□□□□ 0.31
CNTNAP3B-215ENST00000619138 IFT172Q9UG01 1749 aa17■□□□□ 0.31
CNTNAP3B-215ENST00000619138 TPM2P07951 284 aa17■□□□□ 0.31
CNTNAP3B-215ENST00000619138 MAPK8IP2Q13387 824 aaPredicted RBP17■□□□□ 0.31
CNTNAP3B-215ENST00000619138 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
CNTNAP3B-215ENST00000619138 CD2BP2O95400 341 aaKnown RBP16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 RBM27Q9P2N5 1060 aaKnown RBP16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 WASLO00401 505 aaPredicted RBP16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 NUDT16Q96DE0 195 aaKnown RBP16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 UQCRHLA0A096LP55 91 aa16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 UQCRHP07919 91 aa16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 FBLN1P23142 703 aa16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 TMEM57Q8N5G2 664 aa16.99■□□□□ 0.31
CNTNAP3B-215ENST00000619138 PDCL3Q9H2J4 239 aa16.98■□□□□ 0.31
CNTNAP3B-215ENST00000619138 KIAA1210Q9ULL0 1709 aa16.98■□□□□ 0.31
CNTNAP3B-215ENST00000619138 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
CNTNAP3B-215ENST00000619138 PRPF40AO75400 957 aaKnown RBP16.98■□□□□ 0.31
CNTNAP3B-215ENST00000619138 TRIM27P14373 513 aa16.97■□□□□ 0.31
CNTNAP3B-215ENST00000619138 TRMT2AQ8IZ69 625 aaKnown RBP16.97■□□□□ 0.31
CNTNAP3B-215ENST00000619138 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
CNTNAP3B-215ENST00000619138 SETBP1Q9Y6X0 1596 aa16.97■□□□□ 0.31
CNTNAP3B-215ENST00000619138 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
CNTNAP3B-215ENST00000619138 ATAD2Q6PL18 1390 aa16.96■□□□□ 0.31
CNTNAP3B-215ENST00000619138 SBNO2Q9Y2G9 1366 aa16.96■□□□□ 0.31
CNTNAP3B-215ENST00000619138 FER1L4A9Z1Z3 1794 aa16.96■□□□□ 0.31
CNTNAP3B-215ENST00000619138 QRICH2Q9H0J4 1663 aa16.96■□□□□ 0.31
CNTNAP3B-215ENST00000619138 FAM177BA6PVY3 158 aa16.96■□□□□ 0.31
CNTNAP3B-215ENST00000619138 CCDC173Q0VFZ6 552 aa16.96■□□□□ 0.31
CNTNAP3B-215ENST00000619138 NGDNQ8NEJ9 315 aaKnown RBP16.96■□□□□ 0.31
CNTNAP3B-215ENST00000619138 HSPA2P54652 639 aa16.95■□□□□ 0.3
CNTNAP3B-215ENST00000619138 SKOR2Q2VWA4 1001 aaPredicted RBP16.95■□□□□ 0.3
CNTNAP3B-215ENST00000619138 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.95■□□□□ 0.3
CNTNAP3B-215ENST00000619138 ASXL1Q8IXJ9 1541 aa16.95■□□□□ 0.3
CNTNAP3B-215ENST00000619138 NLRP1Q9C000 1473 aa16.95■□□□□ 0.3
CNTNAP3B-215ENST00000619138 KCNA6P17658 529 aa16.95■□□□□ 0.3
CNTNAP3B-215ENST00000619138 TSC1Q92574 1164 aa16.95■□□□□ 0.3
CNTNAP3B-215ENST00000619138 DDX19BQ9UMR2 479 aa16.94■□□□□ 0.3
CNTNAP3B-215ENST00000619138 A0A1W2PP64 1363 aa16.94■□□□□ 0.3
CNTNAP3B-215ENST00000619138 ABCC11Q96J66 1382 aa16.94■□□□□ 0.3
CNTNAP3B-215ENST00000619138 RIMS1Q86UR5 1692 aaKnown RBP16.93■□□□□ 0.3
CNTNAP3B-215ENST00000619138 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
CNTNAP3B-215ENST00000619138 ROBO2Q9HCK4 1378 aa16.93■□□□□ 0.3
CNTNAP3B-215ENST00000619138 K7ELQ4 463 aaPredicted RBP16.92■□□□□ 0.3
CNTNAP3B-215ENST00000619138 LMOD2Q6P5Q4 547 aa16.92■□□□□ 0.3
CNTNAP3B-215ENST00000619138 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
CNTNAP3B-215ENST00000619138 PTPRMP28827 1452 aa16.92■□□□□ 0.3
CNTNAP3B-215ENST00000619138 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
CNTNAP3B-215ENST00000619138 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
CNTNAP3B-215ENST00000619138 TBX22Q9Y458 520 aa16.91■□□□□ 0.3
CNTNAP3B-215ENST00000619138 ANKRD36BQ8N2N9 1353 aa16.91■□□□□ 0.3
CNTNAP3B-215ENST00000619138 NME9Q86XW9 330 aa16.91■□□□□ 0.3
CNTNAP3B-215ENST00000619138 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
CNTNAP3B-215ENST00000619138 SYCE3A1L190 88 aa16.9■□□□□ 0.3
CNTNAP3B-215ENST00000619138 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
CNTNAP3B-215ENST00000619138 PKP1Q13835 747 aa16.9■□□□□ 0.3
CNTNAP3B-215ENST00000619138 ATF7IPQ6VMQ6 1270 aa16.9■□□□□ 0.3
CNTNAP3B-215ENST00000619138 C3P01024 1663 aa16.9■□□□□ 0.3
CNTNAP3B-215ENST00000619138 TULP4Q9NRJ4 1543 aa16.9■□□□□ 0.3
CNTNAP3B-215ENST00000619138 FYB1O15117 783 aa16.89■□□□□ 0.29
CNTNAP3B-215ENST00000619138 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
CNTNAP3B-215ENST00000619138 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
CNTNAP3B-215ENST00000619138 RIPK4P57078 832 aa16.89■□□□□ 0.29
CNTNAP3B-215ENST00000619138 PRIM1P49642 420 aaKnown RBP16.88■□□□□ 0.29
CNTNAP3B-215ENST00000619138 RAB3GAP1Q15042 981 aa16.88■□□□□ 0.29
CNTNAP3B-215ENST00000619138 ZNF830Q96NB3 372 aaPredicted RBP16.88■□□□□ 0.29
CNTNAP3B-215ENST00000619138 RBSNQ9H1K0 784 aa16.87■□□□□ 0.29
CNTNAP3B-215ENST00000619138 PPIP5K1Q6PFW1 1433 aa16.87■□□□□ 0.29
CNTNAP3B-215ENST00000619138 TBC1D9Q6ZT07 1266 aa16.87■□□□□ 0.29
CNTNAP3B-215ENST00000619138 IGSF3O75054 1194 aa16.87■□□□□ 0.29
CNTNAP3B-215ENST00000619138 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
CNTNAP3B-215ENST00000619138 ARHGEF28Q8N1W1 1705 aaKnown RBP16.86■□□□□ 0.29
CNTNAP3B-215ENST00000619138 OFD1O75665 1012 aa16.86■□□□□ 0.29
CNTNAP3B-215ENST00000619138 COG3Q96JB2 828 aa16.86■□□□□ 0.29
CNTNAP3B-215ENST00000619138 PROSER2Q86WR7 435 aaPredicted RBP16.86■□□□□ 0.29
CNTNAP3B-215ENST00000619138 ZNF692Q9BU19 519 aaPredicted RBP16.86■□□□□ 0.29
CNTNAP3B-215ENST00000619138 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
CNTNAP3B-215ENST00000619138 CBX1P83916 185 aa16.85■□□□□ 0.29
CNTNAP3B-215ENST00000619138 ZSCAN23Q3MJ62 389 aa16.85■□□□□ 0.29
CNTNAP3B-215ENST00000619138 RRS1Q15050 365 aaKnown RBP16.85■□□□□ 0.29
CNTNAP3B-215ENST00000619138 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
CNTNAP3B-215ENST00000619138 ACEP12821 1306 aa16.84■□□□□ 0.29
CNTNAP3B-215ENST00000619138 UBR1Q8IWV7 1749 aa16.84■□□□□ 0.29
CNTNAP3B-215ENST00000619138 ZGPATQ8N5A5 531 aaKnown RBP16.84■□□□□ 0.29
CNTNAP3B-215ENST00000619138 GDPD2Q9HCC8 539 aa16.84■□□□□ 0.29
CNTNAP3B-215ENST00000619138 INSRP06213 1382 aa16.84■□□□□ 0.29
CNTNAP3B-215ENST00000619138 WDR63Q8IWG1 891 aa16.83■□□□□ 0.29
CNTNAP3B-215ENST00000619138 PRR36Q9H6K5 1346 aa16.83■□□□□ 0.29
CNTNAP3B-215ENST00000619138 DTNBO60941 627 aa16.83■□□□□ 0.28
CNTNAP3B-215ENST00000619138 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.28
CNTNAP3B-215ENST00000619138 SMC5Q8IY18 1101 aa16.83■□□□□ 0.28
CNTNAP3B-215ENST00000619138 C17orf53Q8N3J3 647 aaPredicted RBP16.83■□□□□ 0.28
CNTNAP3B-215ENST00000619138 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms