RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
USP43-205ENST00000574408 THUMPD2Q9BTF0 503 aaKnown RBP13.47□□□□□ -0.25
USP43-205ENST00000574408 RBM33Q96EV2 1170 aaKnown RBP13.46□□□□□ -0.25
USP43-205ENST00000574408 SMC4Q9NTJ3 1288 aa13.46□□□□□ -0.25
USP43-205ENST00000574408 RGPD8O14715 1765 aaPredicted RBP13.46□□□□□ -0.25
USP43-205ENST00000574408 RLBP1P12271 317 aa13.46□□□□□ -0.25
USP43-205ENST00000574408 SETD1BQ9UPS6 1966 aaKnown RBP13.46□□□□□ -0.25
USP43-205ENST00000574408 HSP90AB2PQ58FF8 381 aa13.45□□□□□ -0.26
USP43-205ENST00000574408 USP31Q70CQ4 1352 aa13.45□□□□□ -0.26
USP43-205ENST00000574408 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
USP43-205ENST00000574408 ANKARQ7Z5J8 1434 aa13.45□□□□□ -0.26
USP43-205ENST00000574408 ZNF142P52746 1687 aaPredicted RBP13.45□□□□□ -0.26
USP43-205ENST00000574408 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
USP43-205ENST00000574408 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
USP43-205ENST00000574408 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
USP43-205ENST00000574408 MS4A1P11836 297 aa13.44□□□□□ -0.26
USP43-205ENST00000574408 ZKSCAN2Q63HK3 967 aa13.44□□□□□ -0.26
USP43-205ENST00000574408 MAP3K19Q56UN5 1328 aa13.43□□□□□ -0.26
USP43-205ENST00000574408 CALD1Q05682 793 aaKnown RBP13.43□□□□□ -0.26
USP43-205ENST00000574408 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
USP43-205ENST00000574408 PDE4AP27815 886 aa13.43□□□□□ -0.26
USP43-205ENST00000574408 NLRP6P59044 892 aa13.43□□□□□ -0.26
USP43-205ENST00000574408 LMOD3Q0VAK6 560 aa13.42□□□□□ -0.26
USP43-205ENST00000574408 NUTM2GQ5VZR2 741 aa13.42□□□□□ -0.26
USP43-205ENST00000574408 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
USP43-205ENST00000574408 FMN2Q9NZ56 1722 aa13.41□□□□□ -0.26
USP43-205ENST00000574408 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
USP43-205ENST00000574408 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
USP43-205ENST00000574408 IGHDP01880 384 aa13.41□□□□□ -0.26
USP43-205ENST00000574408 DZIP1LQ8IYY4 767 aaKnown RBP13.41□□□□□ -0.26
USP43-205ENST00000574408 PEAK1Q9H792 1746 aa13.41□□□□□ -0.26
USP43-205ENST00000574408 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
USP43-205ENST00000574408 GNAI1P63096 354 aa13.41□□□□□ -0.26
USP43-205ENST00000574408 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
USP43-205ENST00000574408 AMPHP49418 695 aa13.41□□□□□ -0.26
USP43-205ENST00000574408 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
USP43-205ENST00000574408 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
USP43-205ENST00000574408 DCTN1Q14203 1278 aa13.4□□□□□ -0.26
USP43-205ENST00000574408 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
USP43-205ENST00000574408 TRIM27P14373 513 aa13.4□□□□□ -0.26
USP43-205ENST00000574408 RGS3P49796 1198 aa13.4□□□□□ -0.26
USP43-205ENST00000574408 FLT4P35916 1363 aa13.4□□□□□ -0.26
USP43-205ENST00000574408 MVPQ14764 893 aaKnown RBP13.39□□□□□ -0.27
USP43-205ENST00000574408 ABTB2Q8N961 1025 aa13.39□□□□□ -0.27
USP43-205ENST00000574408 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
USP43-205ENST00000574408 NOB1Q9ULX3 412 aaKnown RBP13.39□□□□□ -0.27
USP43-205ENST00000574408 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
USP43-205ENST00000574408 PIK3C2AO00443 1686 aa13.39□□□□□ -0.27
USP43-205ENST00000574408 EIF5BO60841 1220 aaKnown RBP13.39□□□□□ -0.27
USP43-205ENST00000574408 AAMPQ13685 434 aa13.39□□□□□ -0.27
USP43-205ENST00000574408 ATF7IPQ6VMQ6 1270 aa13.39□□□□□ -0.27
USP43-205ENST00000574408 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
USP43-205ENST00000574408 ANP32AP39687 249 aaKnown RBP13.38□□□□□ -0.27
USP43-205ENST00000574408 KIF16BQ96L93 1317 aa13.38□□□□□ -0.27
USP43-205ENST00000574408 PCDHB15Q9Y5E8 787 aa13.38□□□□□ -0.27
USP43-205ENST00000574408 ADGRL3Q9HAR2 1447 aa13.38□□□□□ -0.27
USP43-205ENST00000574408 ELL2O00472 640 aaPredicted RBP13.38□□□□□ -0.27
USP43-205ENST00000574408 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
USP43-205ENST00000574408 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
USP43-205ENST00000574408 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
USP43-205ENST00000574408 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
USP43-205ENST00000574408 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
USP43-205ENST00000574408 ESCO1Q5FWF5 840 aa13.37□□□□□ -0.27
USP43-205ENST00000574408 ITPRIPQ8IWB1 547 aa13.37□□□□□ -0.27
USP43-205ENST00000574408 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
USP43-205ENST00000574408 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
USP43-205ENST00000574408 ARHGEF10O15013 1369 aa13.36□□□□□ -0.27
USP43-205ENST00000574408 VAMP4O75379 141 aa13.36□□□□□ -0.27
USP43-205ENST00000574408 ZNF428Q96B54 188 aa13.36□□□□□ -0.27
USP43-205ENST00000574408 MCM10Q7L590 875 aa13.35□□□□□ -0.27
USP43-205ENST00000574408 EYA1Q99502 592 aa13.35□□□□□ -0.27
USP43-205ENST00000574408 PSME1Q06323 249 aa13.34□□□□□ -0.27
USP43-205ENST00000574408 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
USP43-205ENST00000574408 TMEM57Q8N5G2 664 aa13.34□□□□□ -0.27
USP43-205ENST00000574408 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
USP43-205ENST00000574408 RGPD1P0DJD0 1748 aa13.34□□□□□ -0.27
USP43-205ENST00000574408 C8orf58Q8NAV2 365 aa13.34□□□□□ -0.27
USP43-205ENST00000574408 HOXC9P31274 260 aa13.33□□□□□ -0.27
USP43-205ENST00000574408 LTV1Q96GA3 475 aaPredicted RBP13.33□□□□□ -0.28
USP43-205ENST00000574408 RWDD1Q9H446 243 aaPredicted RBP13.33□□□□□ -0.28
USP43-205ENST00000574408 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.28
USP43-205ENST00000574408 FOXO3O43524 673 aa13.32□□□□□ -0.28
USP43-205ENST00000574408 PROSER2Q86WR7 435 aaPredicted RBP13.32□□□□□ -0.28
USP43-205ENST00000574408 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
USP43-205ENST00000574408 ANO8Q9HCE9 1232 aaPredicted RBP13.32□□□□□ -0.28
USP43-205ENST00000574408 MTHFSDQ2M296 383 aaKnown RBP13.32□□□□□ -0.28
USP43-205ENST00000574408 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
USP43-205ENST00000574408 KDRP35968 1356 aa13.31□□□□□ -0.28
USP43-205ENST00000574408 BRPF1P55201 1214 aaPredicted RBP13.31□□□□□ -0.28
USP43-205ENST00000574408 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
USP43-205ENST00000574408 ORAI2Q96SN7 254 aa13.31□□□□□ -0.28
USP43-205ENST00000574408 XPCQ01831 940 aaPredicted RBP13.3□□□□□ -0.28
USP43-205ENST00000574408 RTF1Q92541 710 aaKnown RBP13.3□□□□□ -0.28
USP43-205ENST00000574408 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
USP43-205ENST00000574408 KIF24Q5T7B8 1368 aa13.3□□□□□ -0.28
USP43-205ENST00000574408 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
USP43-205ENST00000574408 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
USP43-205ENST00000574408 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
USP43-205ENST00000574408 CHL1O00533 1208 aa13.3□□□□□ -0.28
USP43-205ENST00000574408 KRT24Q2M2I5 525 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms