RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 USP31Q70CQ4 1352 aa18.62■□□□□ 0.57
NUMB-216ENST00000555394 MS4A1P11836 297 aa18.6■□□□□ 0.57
NUMB-216ENST00000555394 FAM83GA6ND36 823 aa18.6■□□□□ 0.57
NUMB-216ENST00000555394 DNAJC5Q9H3Z4 198 aa18.6■□□□□ 0.57
NUMB-216ENST00000555394 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
NUMB-216ENST00000555394 ZKSCAN2Q63HK3 967 aa18.6■□□□□ 0.57
NUMB-216ENST00000555394 MAP3K19Q56UN5 1328 aa18.6■□□□□ 0.57
NUMB-216ENST00000555394 DCTN1Q14203 1278 aa18.58■□□□□ 0.57
NUMB-216ENST00000555394 ADAMTSL3P82987 1691 aa18.58■□□□□ 0.57
NUMB-216ENST00000555394 NLRP6P59044 892 aa18.58■□□□□ 0.56
NUMB-216ENST00000555394 BACH2Q9BYV9 841 aa18.58■□□□□ 0.56
NUMB-216ENST00000555394 RGPD8O14715 1765 aaPredicted RBP18.58■□□□□ 0.56
NUMB-216ENST00000555394 NOB1Q9ULX3 412 aaKnown RBP18.57■□□□□ 0.56
NUMB-216ENST00000555394 TRIM27P14373 513 aa18.57■□□□□ 0.56
NUMB-216ENST00000555394 PCDHB15Q9Y5E8 787 aa18.57■□□□□ 0.56
NUMB-216ENST00000555394 DZIP1LQ8IYY4 767 aaKnown RBP18.56■□□□□ 0.56
NUMB-216ENST00000555394 ANKARQ7Z5J8 1434 aa18.56■□□□□ 0.56
NUMB-216ENST00000555394 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
NUMB-216ENST00000555394 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
NUMB-216ENST00000555394 RGS3P49796 1198 aa18.55■□□□□ 0.56
NUMB-216ENST00000555394 MVPQ14764 893 aaKnown RBP18.55■□□□□ 0.56
NUMB-216ENST00000555394 TSPYL6Q8N831 410 aa18.55■□□□□ 0.56
NUMB-216ENST00000555394 MBIPQ9NS73 344 aa18.55■□□□□ 0.56
NUMB-216ENST00000555394 ELL2O00472 640 aaPredicted RBP18.55■□□□□ 0.56
NUMB-216ENST00000555394 IFT57Q9NWB7 429 aa18.55■□□□□ 0.56
NUMB-216ENST00000555394 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
NUMB-216ENST00000555394 ZNF853P0CG23 659 aa18.54■□□□□ 0.56
NUMB-216ENST00000555394 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
NUMB-216ENST00000555394 GNAI1P63096 354 aa18.54■□□□□ 0.56
NUMB-216ENST00000555394 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
NUMB-216ENST00000555394 AMPHP49418 695 aa18.53■□□□□ 0.56
NUMB-216ENST00000555394 ABTB2Q8N961 1025 aa18.53■□□□□ 0.56
NUMB-216ENST00000555394 PHF8Q9UPP1 1060 aa18.53■□□□□ 0.56
NUMB-216ENST00000555394 VAMP4O75379 141 aa18.52■□□□□ 0.56
NUMB-216ENST00000555394 LMOD3Q0VAK6 560 aa18.52■□□□□ 0.56
NUMB-216ENST00000555394 CFAP44Q96MT7 982 aa18.52■□□□□ 0.55
NUMB-216ENST00000555394 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
NUMB-216ENST00000555394 NALCNQ8IZF0 1738 aa18.51■□□□□ 0.55
NUMB-216ENST00000555394 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
NUMB-216ENST00000555394 FLT4P35916 1363 aa18.51■□□□□ 0.55
NUMB-216ENST00000555394 ZNF142P52746 1687 aaPredicted RBP18.51■□□□□ 0.55
NUMB-216ENST00000555394 NPHP4O75161 1426 aaPredicted RBP18.51■□□□□ 0.55
NUMB-216ENST00000555394 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
NUMB-216ENST00000555394 NPM2Q86SE8 214 aaKnown RBP18.5■□□□□ 0.55
NUMB-216ENST00000555394 AAMPQ13685 434 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 ESCO1Q5FWF5 840 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 MCM10Q7L590 875 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 C8orf58Q8NAV2 365 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 PIK3C2AO00443 1686 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 SETD1BQ9UPS6 1966 aaKnown RBP18.49■□□□□ 0.55
NUMB-216ENST00000555394 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 EYA1Q99502 592 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 CHD2O14647 1828 aaKnown RBP18.49■□□□□ 0.55
NUMB-216ENST00000555394 ANP32AP39687 249 aaKnown RBP18.49■□□□□ 0.55
NUMB-216ENST00000555394 FMN2Q9NZ56 1722 aa18.49■□□□□ 0.55
NUMB-216ENST00000555394 FOXO3O43524 673 aa18.48■□□□□ 0.55
NUMB-216ENST00000555394 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
NUMB-216ENST00000555394 ANP32EQ9BTT0 268 aa18.47■□□□□ 0.55
NUMB-216ENST00000555394 IPO8O15397 1037 aaKnown RBP18.47■□□□□ 0.55
NUMB-216ENST00000555394 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
NUMB-216ENST00000555394 HOXC9P31274 260 aa18.46■□□□□ 0.55
NUMB-216ENST00000555394 MRPL50Q8N5N7 158 aaKnown RBP18.46■□□□□ 0.55
NUMB-216ENST00000555394 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
NUMB-216ENST00000555394 MTHFSDQ2M296 383 aaKnown RBP18.46■□□□□ 0.55
NUMB-216ENST00000555394 ARHGEF10O15013 1369 aa18.46■□□□□ 0.54
NUMB-216ENST00000555394 PSME1Q06323 249 aa18.45■□□□□ 0.54
NUMB-216ENST00000555394 ADGRL3Q9HAR2 1447 aa18.45■□□□□ 0.54
NUMB-216ENST00000555394 ORAI2Q96SN7 254 aa18.45■□□□□ 0.54
NUMB-216ENST00000555394 DDX19BQ9UMR2 479 aa18.45■□□□□ 0.54
NUMB-216ENST00000555394 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
NUMB-216ENST00000555394 LTV1Q96GA3 475 aaPredicted RBP18.44■□□□□ 0.54
NUMB-216ENST00000555394 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
NUMB-216ENST00000555394 IPO9Q96P70 1041 aaKnown RBP18.44■□□□□ 0.54
NUMB-216ENST00000555394 IGSF1Q8N6C5 1336 aa18.44■□□□□ 0.54
NUMB-216ENST00000555394 DLG5Q8TDM6 1919 aa18.44■□□□□ 0.54
NUMB-216ENST00000555394 C8orf34Q49A92 452 aa18.44■□□□□ 0.54
NUMB-216ENST00000555394 RWDD1Q9H446 243 aaPredicted RBP18.44■□□□□ 0.54
NUMB-216ENST00000555394 RGPD1P0DJD0 1748 aa18.43■□□□□ 0.54
NUMB-216ENST00000555394 XPCQ01831 940 aaPredicted RBP18.43■□□□□ 0.54
NUMB-216ENST00000555394 FAM161AQ3B820 660 aa18.43■□□□□ 0.54
NUMB-216ENST00000555394 CHL1O00533 1208 aa18.42■□□□□ 0.54
NUMB-216ENST00000555394 KDRP35968 1356 aa18.42■□□□□ 0.54
NUMB-216ENST00000555394 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
NUMB-216ENST00000555394 PLEKHG5O94827 1062 aa18.41■□□□□ 0.54
NUMB-216ENST00000555394 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
NUMB-216ENST00000555394 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
NUMB-216ENST00000555394 PDZRN3Q9UPQ7 1066 aa18.41■□□□□ 0.54
NUMB-216ENST00000555394 ERICH6Q7L0X2 663 aa18.41■□□□□ 0.54
NUMB-216ENST00000555394 NOP58Q9Y2X3 529 aaKnown RBP18.39■□□□□ 0.54
NUMB-216ENST00000555394 USHBP1Q8N6Y0 703 aa18.38■□□□□ 0.53
NUMB-216ENST00000555394 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
NUMB-216ENST00000555394 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
NUMB-216ENST00000555394 CRB1P82279 1406 aa18.38■□□□□ 0.53
NUMB-216ENST00000555394 ZBTB7CA1YPR0 619 aa18.38■□□□□ 0.53
NUMB-216ENST00000555394 MARF1Q9Y4F3 1742 aaKnown RBP18.37■□□□□ 0.53
NUMB-216ENST00000555394 KIF24Q5T7B8 1368 aa18.37■□□□□ 0.53
NUMB-216ENST00000555394 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
NUMB-216ENST00000555394 ZBTB7BO15156 539 aaPredicted RBP18.36■□□□□ 0.53
NUMB-216ENST00000555394 HDAC1Q13547 482 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms