RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 LRPPRCP42704 1394 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-206ENST00000555232 SURF6O75683 361 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-206ENST00000555232 GAS2L2Q8NHY3 880 aa15.15■□□□□ 0.02
ARHGEF40-206ENST00000555232 MAP3K19Q56UN5 1328 aa15.14■□□□□ 0.01
ARHGEF40-206ENST00000555232 PLCB2Q00722 1185 aa15.14■□□□□ 0.01
ARHGEF40-206ENST00000555232 RIC3Q7Z5B4 369 aa15.14■□□□□ 0.01
ARHGEF40-206ENST00000555232 SLC39A6Q13433 755 aa15.14■□□□□ 0.01
ARHGEF40-206ENST00000555232 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
ARHGEF40-206ENST00000555232 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
ARHGEF40-206ENST00000555232 KDM5CP41229 1560 aa15.13■□□□□ 0.01
ARHGEF40-206ENST00000555232 MTHFSDQ2M296 383 aaKnown RBP15.13■□□□□ 0.01
ARHGEF40-206ENST00000555232 ADAMTS2O95450 1211 aa15.13■□□□□ 0.01
ARHGEF40-206ENST00000555232 KRT28Q7Z3Y7 464 aa15.13■□□□□ 0.01
ARHGEF40-206ENST00000555232 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
ARHGEF40-206ENST00000555232 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF40-206ENST00000555232 EYA1Q99502 592 aa15.12■□□□□ 0.01
ARHGEF40-206ENST00000555232 ANO2Q9NQ90 1003 aa15.12■□□□□ 0.01
ARHGEF40-206ENST00000555232 ZFYVE16Q7Z3T8 1539 aa15.12■□□□□ 0.01
ARHGEF40-206ENST00000555232 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
ARHGEF40-206ENST00000555232 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
ARHGEF40-206ENST00000555232 C22orf23Q9BZE7 217 aa15.12■□□□□ 0.01
ARHGEF40-206ENST00000555232 GNAT3A8MTJ3 354 aa15.11■□□□□ 0.01
ARHGEF40-206ENST00000555232 NFKBIBQ15653 356 aa15.11■□□□□ 0.01
ARHGEF40-206ENST00000555232 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
ARHGEF40-206ENST00000555232 ZMYND15Q9H091 742 aa15.11■□□□□ 0.01
ARHGEF40-206ENST00000555232 PODXL2Q9NZ53 605 aa15.11■□□□□ 0.01
ARHGEF40-206ENST00000555232 GORABQ5T7V8 394 aa15.11■□□□□ 0.01
ARHGEF40-206ENST00000555232 ERVK-7P63135 1459 aa15.1■□□□□ 0.01
ARHGEF40-206ENST00000555232 SEC24BO95487 1268 aa15.1■□□□□ 0.01
ARHGEF40-206ENST00000555232 KIAA1211Q6ZU35 1233 aa15.1■□□□□ 0.01
ARHGEF40-206ENST00000555232 KDM5DQ9BY66 1539 aa15.1■□□□□ 0.01
ARHGEF40-206ENST00000555232 NAP1L5Q96NT1 182 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF40-206ENST00000555232 PLEKHO1Q53GL0 409 aaPredicted RBP15.1■□□□□ 0.01
ARHGEF40-206ENST00000555232 CCDC30Q5VVM6 783 aa15.09■□□□□ 0.01
ARHGEF40-206ENST00000555232 C16orf71Q8IYS4 520 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF40-206ENST00000555232 FRAT2O75474 233 aaPredicted RBP15.09■□□□□ 0.01
ARHGEF40-206ENST00000555232 MEIS3Q99687 375 aa15.09■□□□□ 0.01
ARHGEF40-206ENST00000555232 PRR36Q9H6K5 1346 aa15.08■□□□□ 0
ARHGEF40-206ENST00000555232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.08■□□□□ 0
ARHGEF40-206ENST00000555232 CFAP44Q96MT7 982 aa15.08■□□□□ 0
ARHGEF40-206ENST00000555232 G2E3Q7L622 706 aa15.07■□□□□ 0
ARHGEF40-206ENST00000555232 NUTM1Q86Y26 1132 aa15.07■□□□□ 0
ARHGEF40-206ENST00000555232 ANP32BQ92688 251 aaKnown RBP15.07■□□□□ 0
ARHGEF40-206ENST00000555232 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
ARHGEF40-206ENST00000555232 NEUROD6Q96NK8 337 aa15.07■□□□□ 0
ARHGEF40-206ENST00000555232 TAF7Q15545 349 aaPredicted RBP15.07■□□□□ 0
ARHGEF40-206ENST00000555232 CHD1LQ86WJ1 897 aa15.07■□□□□ 0
ARHGEF40-206ENST00000555232 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
ARHGEF40-206ENST00000555232 NEXNQ0ZGT2 675 aa15.06■□□□□ 0
ARHGEF40-206ENST00000555232 SRGAP3O43295 1099 aa15.06■□□□□ 0
ARHGEF40-206ENST00000555232 TATP17735 454 aaPredicted RBP15.06■□□□□ 0
ARHGEF40-206ENST00000555232 ANKRD24Q8TF21 1146 aa15.05■□□□□ -0
ARHGEF40-206ENST00000555232 DTNBO60941 627 aa15.05■□□□□ -0
ARHGEF40-206ENST00000555232 VAMP4O75379 141 aa15.05■□□□□ -0
ARHGEF40-206ENST00000555232 GTF2E1P29083 439 aaPredicted RBP15.05■□□□□ -0
ARHGEF40-206ENST00000555232 IL13P35225 146 aa15.05■□□□□ -0
ARHGEF40-206ENST00000555232 LARP6Q9BRS8 491 aaKnown RBP15.05■□□□□ -0
ARHGEF40-206ENST00000555232 GOLGA6L22H0YM25 854 aa15.04■□□□□ -0
ARHGEF40-206ENST00000555232 IFT57Q9NWB7 429 aa15.04■□□□□ -0
ARHGEF40-206ENST00000555232 ROBO2Q9HCK4 1378 aa15.04■□□□□ -0
ARHGEF40-206ENST00000555232 LGR6Q9HBX8 967 aa15.04■□□□□ -0
ARHGEF40-206ENST00000555232 CABP4P57796 275 aa15.04■□□□□ -0
ARHGEF40-206ENST00000555232 TMEM2Q9UHN6 1383 aa15.03■□□□□ -0
ARHGEF40-206ENST00000555232 ATP5J2-PTCD1G3V325 749 aa15.03■□□□□ -0
ARHGEF40-206ENST00000555232 CLTCL1P53675 1640 aa15.03■□□□□ -0
ARHGEF40-206ENST00000555232 GCP02774 474 aa15.03■□□□□ -0
ARHGEF40-206ENST00000555232 NEO1Q92859 1461 aa15.03■□□□□ -0
ARHGEF40-206ENST00000555232 KDM4AO75164 1064 aa15.03■□□□□ -0
ARHGEF40-206ENST00000555232 IFIT2P09913 472 aaKnown RBP15.03■□□□□ -0
ARHGEF40-206ENST00000555232 LRRFIP2Q9Y608 721 aaKnown RBP15.03■□□□□ -0
ARHGEF40-206ENST00000555232 CLASP1Q7Z460 1538 aa15.03■□□□□ -0
ARHGEF40-206ENST00000555232 PI4KAP2A4QPH2 592 aa15.02■□□□□ -0
ARHGEF40-206ENST00000555232 GNAI2P04899 355 aa15.02■□□□□ -0
ARHGEF40-206ENST00000555232 FOSBP53539 338 aa15.02■□□□□ -0
ARHGEF40-206ENST00000555232 PI4KAP1Q8N8J0 262 aa15.02■□□□□ -0
ARHGEF40-206ENST00000555232 PHAXQ9H814 394 aaKnown RBP15.02■□□□□ -0
ARHGEF40-206ENST00000555232 MLH3Q9UHC1 1453 aa15.02■□□□□ -0
ARHGEF40-206ENST00000555232 A0A0U1RQG5 324 aaPredicted RBP15.02■□□□□ -0
ARHGEF40-206ENST00000555232 FLIIQ13045 1269 aa15.02□□□□□ -0.01
ARHGEF40-206ENST00000555232 EIF2AK4Q9P2K8 1649 aaKnown RBP15.01□□□□□ -0.01
ARHGEF40-206ENST00000555232 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
ARHGEF40-206ENST00000555232 PIK3C2GO75747 1445 aa15.01□□□□□ -0.01
ARHGEF40-206ENST00000555232 MCCP23508 829 aa15.01□□□□□ -0.01
ARHGEF40-206ENST00000555232 TBX22Q9Y458 520 aa15□□□□□ -0.01
ARHGEF40-206ENST00000555232 TRPM2O94759 1503 aa15□□□□□ -0.01
ARHGEF40-206ENST00000555232 G3BP1Q13283 466 aaKnown RBP eCLIP15□□□□□ -0.012e-6■□□□□ 10.4
ARHGEF40-206ENST00000555232 SETD1BQ9UPS6 1966 aaKnown RBP15□□□□□ -0.01
ARHGEF40-206ENST00000555232 KCNQ3O43525 872 aa15□□□□□ -0.01
ARHGEF40-206ENST00000555232 CHPF2Q9P2E5 772 aa15□□□□□ -0.01
ARHGEF40-206ENST00000555232 HSP90AA2PQ14568 343 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-206ENST00000555232 NBPF6Q5VWK0 638 aa14.99□□□□□ -0.01
ARHGEF40-206ENST00000555232 OTUD7AQ8TE49 926 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF40-206ENST00000555232 NBPF4Q96M43 638 aa14.99□□□□□ -0.01
ARHGEF40-206ENST00000555232 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
ARHGEF40-206ENST00000555232 HOXC9P31274 260 aa14.99□□□□□ -0.01
ARHGEF40-206ENST00000555232 STK11IPQ8N1F8 1099 aa14.98□□□□□ -0.01
ARHGEF40-206ENST00000555232 NFATC2IPQ8NCF5 419 aa14.98□□□□□ -0.01
ARHGEF40-206ENST00000555232 DNAJC2Q99543 621 aaKnown RBP14.98□□□□□ -0.01
ARHGEF40-206ENST00000555232 DDX58O95786 925 aaKnown RBP14.98□□□□□ -0.01
ARHGEF40-206ENST00000555232 ZBTB3Q9H5J0 574 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms