RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TPRNQ4KMQ1 711 aa16.37■□□□□ 0.21
CAPN1-202ENST00000524773 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
CAPN1-202ENST00000524773 IFT172Q9UG01 1749 aa16.36■□□□□ 0.21
CAPN1-202ENST00000524773 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-202ENST00000524773 ZGPATQ8N5A5 531 aaKnown RBP16.35■□□□□ 0.21
CAPN1-202ENST00000524773 TULP4Q9NRJ4 1543 aa16.35■□□□□ 0.21
CAPN1-202ENST00000524773 KRT24Q2M2I5 525 aa16.35■□□□□ 0.21
CAPN1-202ENST00000524773 FOXD4L6Q3SYB3 417 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-202ENST00000524773 FOXD4L3Q6VB84 417 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-202ENST00000524773 MPNDQ8N594 471 aa16.35■□□□□ 0.21
CAPN1-202ENST00000524773 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
CAPN1-202ENST00000524773 PUS7Q96PZ0 661 aaKnown RBP16.34■□□□□ 0.21
CAPN1-202ENST00000524773 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
CAPN1-202ENST00000524773 VAMP4O75379 141 aa16.34■□□□□ 0.21
CAPN1-202ENST00000524773 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-202ENST00000524773 GLIPR1L2Q4G1C9 344 aa16.34■□□□□ 0.21
CAPN1-202ENST00000524773 ZRANB1Q9UGI0 708 aa16.34■□□□□ 0.21
CAPN1-202ENST00000524773 KIF13AQ9H1H9 1805 aa16.33■□□□□ 0.21
CAPN1-202ENST00000524773 C8orf58Q8NAV2 365 aa16.33■□□□□ 0.21
CAPN1-202ENST00000524773 ADGRB1O14514 1584 aa16.33■□□□□ 0.2
CAPN1-202ENST00000524773 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
CAPN1-202ENST00000524773 RRP9O43818 475 aaKnown RBP16.33■□□□□ 0.2
CAPN1-202ENST00000524773 MRPL50Q8N5N7 158 aaKnown RBP16.33■□□□□ 0.2
CAPN1-202ENST00000524773 NOL8Q76FK4 1167 aaKnown RBP16.32■□□□□ 0.2
CAPN1-202ENST00000524773 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
CAPN1-202ENST00000524773 PRPF40AO75400 957 aaKnown RBP16.32■□□□□ 0.2
CAPN1-202ENST00000524773 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-202ENST00000524773 RBSNQ9H1K0 784 aa16.32■□□□□ 0.2
CAPN1-202ENST00000524773 CIZ1Q9ULV3 898 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-202ENST00000524773 EMILIN1Q9Y6C2 1016 aa16.32■□□□□ 0.2
CAPN1-202ENST00000524773 RPGRIP1LQ68CZ1 1315 aa16.31■□□□□ 0.2
CAPN1-202ENST00000524773 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
CAPN1-202ENST00000524773 ADGRB2O60241 1585 aa16.31■□□□□ 0.2
CAPN1-202ENST00000524773 NSFL1CQ9UNZ2 370 aaKnown RBP16.31■□□□□ 0.2
CAPN1-202ENST00000524773 R3HCC1Q9Y3T6 440 aaKnown RBP16.31■□□□□ 0.2
CAPN1-202ENST00000524773 PRIM1P49642 420 aaKnown RBP16.3■□□□□ 0.2
CAPN1-202ENST00000524773 SKOR2Q2VWA4 1001 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-202ENST00000524773 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
CAPN1-202ENST00000524773 RNF214Q8ND24 703 aa16.3■□□□□ 0.2
CAPN1-202ENST00000524773 ADGRB3O60242 1522 aa16.3■□□□□ 0.2
CAPN1-202ENST00000524773 USP32Q8NFA0 1604 aa16.3■□□□□ 0.2
CAPN1-202ENST00000524773 GOLGA6L22H0YM25 854 aa16.29■□□□□ 0.2
CAPN1-202ENST00000524773 CDC45O75419 566 aa16.29■□□□□ 0.2
CAPN1-202ENST00000524773 ZSCAN23Q3MJ62 389 aa16.29■□□□□ 0.2
CAPN1-202ENST00000524773 PLEKHM2Q8IWE5 1019 aa16.29■□□□□ 0.2
CAPN1-202ENST00000524773 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
CAPN1-202ENST00000524773 IDI1Q13907 227 aa16.29■□□□□ 0.2
CAPN1-202ENST00000524773 FAM13BQ9NYF5 915 aa16.29■□□□□ 0.2
CAPN1-202ENST00000524773 ZC3H13Q5T200 1668 aaKnown RBP16.29■□□□□ 0.2
CAPN1-202ENST00000524773 MSNP26038 577 aaKnown RBP16.28■□□□□ 0.2
CAPN1-202ENST00000524773 TWISTNBQ3B726 338 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-202ENST00000524773 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
CAPN1-202ENST00000524773 CCDC173Q0VFZ6 552 aa16.28■□□□□ 0.2
CAPN1-202ENST00000524773 ALDH1L2Q3SY69 923 aa16.28■□□□□ 0.2
CAPN1-202ENST00000524773 SIGLEC1Q9BZZ2 1709 aa16.28■□□□□ 0.2
CAPN1-202ENST00000524773 CALD1Q05682 793 aaKnown RBP16.27■□□□□ 0.2
CAPN1-202ENST00000524773 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
CAPN1-202ENST00000524773 ZSCAN30Q86W11 494 aa16.27■□□□□ 0.2
CAPN1-202ENST00000524773 POLKQ9UBT6 870 aa16.27■□□□□ 0.2
CAPN1-202ENST00000524773 COL3A1P02461 1466 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-202ENST00000524773 NSD2O96028 1365 aa16.27■□□□□ 0.2
CAPN1-202ENST00000524773 ANP32BQ92688 251 aaKnown RBP16.27■□□□□ 0.19
CAPN1-202ENST00000524773 CDK19Q9BWU1 502 aa16.27■□□□□ 0.19
CAPN1-202ENST00000524773 LMBRD1Q9NUN5 540 aa16.27■□□□□ 0.19
CAPN1-202ENST00000524773 VGFO15240 615 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-202ENST00000524773 DTNBO60941 627 aa16.26■□□□□ 0.19
CAPN1-202ENST00000524773 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
CAPN1-202ENST00000524773 WAPLQ7Z5K2 1190 aa16.26■□□□□ 0.19
CAPN1-202ENST00000524773 GPT2Q8TD30 523 aa16.26■□□□□ 0.19
CAPN1-202ENST00000524773 TERF2IPQ9NYB0 399 aa16.26■□□□□ 0.19
CAPN1-202ENST00000524773 IL16Q14005 1332 aa16.26■□□□□ 0.19
CAPN1-202ENST00000524773 NCKAP5LQ9HCH0 1330 aa16.26■□□□□ 0.19
CAPN1-202ENST00000524773 SYCE3A1L190 88 aa16.25■□□□□ 0.19
CAPN1-202ENST00000524773 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-202ENST00000524773 PPP1R9BQ96SB3 815 aa16.24■□□□□ 0.19
CAPN1-202ENST00000524773 USP26Q9BXU7 913 aa16.24■□□□□ 0.19
CAPN1-202ENST00000524773 SLC52A1Q9NWF4 448 aa16.24■□□□□ 0.19
CAPN1-202ENST00000524773 ISY1Q9ULR0 285 aaKnown RBP16.24■□□□□ 0.19
CAPN1-202ENST00000524773 ZDHHC9Q9Y397 364 aa16.24■□□□□ 0.19
CAPN1-202ENST00000524773 FCHSD2O94868 740 aa16.24■□□□□ 0.19
CAPN1-202ENST00000524773 SDSP20132 328 aa16.24■□□□□ 0.19
CAPN1-202ENST00000524773 MLECQ14165 292 aa16.23■□□□□ 0.19
CAPN1-202ENST00000524773 NFE2L2Q16236 605 aa16.23■□□□□ 0.19
CAPN1-202ENST00000524773 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.23■□□□□ 0.19
CAPN1-202ENST00000524773 REREQ9P2R6 1566 aa16.23■□□□□ 0.19
CAPN1-202ENST00000524773 PPLO60437 1756 aa16.23■□□□□ 0.19
CAPN1-202ENST00000524773 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
CAPN1-202ENST00000524773 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-202ENST00000524773 NME9Q86XW9 330 aa16.23■□□□□ 0.19
CAPN1-202ENST00000524773 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
CAPN1-202ENST00000524773 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
CAPN1-202ENST00000524773 AGLP35573 1532 aa16.22■□□□□ 0.19
CAPN1-202ENST00000524773 LRRC7Q96NW7 1537 aa16.22■□□□□ 0.19
CAPN1-202ENST00000524773 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
CAPN1-202ENST00000524773 TMEM63CQ9P1W3 806 aa16.22■□□□□ 0.19
CAPN1-202ENST00000524773 PIK3C2BO00750 1634 aa16.21■□□□□ 0.19
CAPN1-202ENST00000524773 SOX12O15370 315 aa16.21■□□□□ 0.19
CAPN1-202ENST00000524773 FBXO31Q5XUX0 539 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-202ENST00000524773 OFD1O75665 1012 aa16.2■□□□□ 0.18
CAPN1-202ENST00000524773 RABEP1Q15276 862 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms