RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 NUTM2FA1L443 756 aa22.81■■□□□ 1.24
PDE8A-204ENST00000478717 MCM4P33991 863 aa22.81■■□□□ 1.24
PDE8A-204ENST00000478717 ELL2O00472 640 aaPredicted RBP22.8■■□□□ 1.24
PDE8A-204ENST00000478717 IL13P35225 146 aa22.8■■□□□ 1.24
PDE8A-204ENST00000478717 DDX19BQ9UMR2 479 aa22.8■■□□□ 1.24
PDE8A-204ENST00000478717 KIF20BQ96Q89 1820 aa22.8■■□□□ 1.24
PDE8A-204ENST00000478717 CPSF1Q10570 1443 aaKnown RBP22.8■■□□□ 1.24
PDE8A-204ENST00000478717 LRRC7Q96NW7 1537 aa22.8■■□□□ 1.24
PDE8A-204ENST00000478717 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
PDE8A-204ENST00000478717 NFE2L2Q16236 605 aa22.78■■□□□ 1.24
PDE8A-204ENST00000478717 COG3Q96JB2 828 aa22.78■■□□□ 1.24
PDE8A-204ENST00000478717 MAP2P11137 1827 aaKnown RBP22.78■■□□□ 1.24
PDE8A-204ENST00000478717 FAM135BQ49AJ0 1406 aa22.78■■□□□ 1.24
PDE8A-204ENST00000478717 TRAK2O60296 914 aa22.77■■□□□ 1.24
PDE8A-204ENST00000478717 PLEKHG5O94827 1062 aa22.77■■□□□ 1.24
PDE8A-204ENST00000478717 TSPYL6Q8N831 410 aa22.77■■□□□ 1.24
PDE8A-204ENST00000478717 EDC4Q6P2E9 1401 aaKnown RBP22.77■■□□□ 1.24
PDE8A-204ENST00000478717 NRXN3Q9Y4C0 1643 aa22.76■■□□□ 1.23
PDE8A-204ENST00000478717 ESPNB1AK53 854 aa22.76■■□□□ 1.23
PDE8A-204ENST00000478717 IPO8O15397 1037 aaKnown RBP22.75■■□□□ 1.23
PDE8A-204ENST00000478717 HDGFP51858 240 aaKnown RBP22.75■■□□□ 1.23
PDE8A-204ENST00000478717 ZBTB40Q9NUA8 1239 aa22.75■■□□□ 1.23
PDE8A-204ENST00000478717 PRR36Q9H6K5 1346 aa22.75■■□□□ 1.23
PDE8A-204ENST00000478717 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
PDE8A-204ENST00000478717 KIF16BQ96L93 1317 aa22.74■■□□□ 1.23
PDE8A-204ENST00000478717 CPS1P31327 1500 aa22.73■■□□□ 1.23
PDE8A-204ENST00000478717 VAMP4O75379 141 aa22.73■■□□□ 1.23
PDE8A-204ENST00000478717 HDAC1Q13547 482 aaPredicted RBP22.73■■□□□ 1.23
PDE8A-204ENST00000478717 ALDH1L2Q3SY69 923 aa22.73■■□□□ 1.23
PDE8A-204ENST00000478717 PLPPR3Q6T4P5 718 aa22.73■■□□□ 1.23
PDE8A-204ENST00000478717 DCTN1Q14203 1278 aa22.72■■□□□ 1.23
PDE8A-204ENST00000478717 TNRQ92752 1358 aa22.72■■□□□ 1.23
PDE8A-204ENST00000478717 GRPEL1Q9HAV7 217 aa22.72■■□□□ 1.23
PDE8A-204ENST00000478717 MBIPQ9NS73 344 aa22.72■■□□□ 1.23
PDE8A-204ENST00000478717 ROBO2Q9HCK4 1378 aa22.71■■□□□ 1.23
PDE8A-204ENST00000478717 CEBPAP49715 358 aaPredicted RBP22.71■■□□□ 1.23
PDE8A-204ENST00000478717 PODXL2Q9NZ53 605 aa22.71■■□□□ 1.23
PDE8A-204ENST00000478717 MRE11P49959 708 aa22.71■■□□□ 1.23
PDE8A-204ENST00000478717 LTKP29376 864 aa22.7■■□□□ 1.22
PDE8A-204ENST00000478717 TBC1D32Q96NH3 1257 aa22.7■■□□□ 1.22
PDE8A-204ENST00000478717 CDC42BPGQ6DT37 1551 aa22.7■■□□□ 1.22
PDE8A-204ENST00000478717 UPF2Q9HAU5 1272 aaKnown RBP22.69■■□□□ 1.22
PDE8A-204ENST00000478717 TMEM2Q9UHN6 1383 aa22.69■■□□□ 1.22
PDE8A-204ENST00000478717 SLC26A8Q96RN1 970 aa22.69■■□□□ 1.22
PDE8A-204ENST00000478717 SIRT1Q96EB6 747 aa22.68■■□□□ 1.22
PDE8A-204ENST00000478717 ZNF692Q9BU19 519 aaPredicted RBP22.68■■□□□ 1.22
PDE8A-204ENST00000478717 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
PDE8A-204ENST00000478717 SOX12O15370 315 aa22.68■■□□□ 1.22
PDE8A-204ENST00000478717 GNAI1P63096 354 aa22.68■■□□□ 1.22
PDE8A-204ENST00000478717 AATKQ6ZMQ8 1374 aa22.68■■□□□ 1.22
PDE8A-204ENST00000478717 AEBP1Q8IUX7 1158 aa22.67■■□□□ 1.22
PDE8A-204ENST00000478717 SMC5Q8IY18 1101 aa22.67■■□□□ 1.22
PDE8A-204ENST00000478717 MRPL50Q8N5N7 158 aaKnown RBP22.67■■□□□ 1.22
PDE8A-204ENST00000478717 C8orf58Q8NAV2 365 aa22.67■■□□□ 1.22
PDE8A-204ENST00000478717 C1orf115Q9H7X2 142 aa22.66■■□□□ 1.22
PDE8A-204ENST00000478717 IFT57Q9NWB7 429 aa22.66■■□□□ 1.22
PDE8A-204ENST00000478717 ZNF853P0CG23 659 aa22.66■■□□□ 1.22
PDE8A-204ENST00000478717 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
PDE8A-204ENST00000478717 TRIM44Q96DX7 344 aaPredicted RBP22.66■■□□□ 1.22
PDE8A-204ENST00000478717 ACEP12821 1306 aa22.65■■□□□ 1.22
PDE8A-204ENST00000478717 TWISTNBQ3B726 338 aaPredicted RBP22.65■■□□□ 1.22
PDE8A-204ENST00000478717 LNPKQ9C0E8 428 aa22.65■■□□□ 1.22
PDE8A-204ENST00000478717 CDK12Q9NYV4 1490 aaPredicted RBP22.65■■□□□ 1.22
PDE8A-204ENST00000478717 ZBTB7BO15156 539 aaPredicted RBP22.64■■□□□ 1.22
PDE8A-204ENST00000478717 SULT6B1Q6IMI4 303 aa22.64■■□□□ 1.22
PDE8A-204ENST00000478717 GAS2L3Q86XJ1 694 aa22.64■■□□□ 1.22
PDE8A-204ENST00000478717 RBM10P98175 930 aaKnown RBP22.64■■□□□ 1.21
PDE8A-204ENST00000478717 CFAP44Q96MT7 982 aa22.64■■□□□ 1.21
PDE8A-204ENST00000478717 TECPR2O15040 1411 aa22.64■■□□□ 1.21
PDE8A-204ENST00000478717 MFAP1P55081 439 aaKnown RBP22.63■■□□□ 1.21
PDE8A-204ENST00000478717 ZNF428Q96B54 188 aa22.63■■□□□ 1.21
PDE8A-204ENST00000478717 TTC21BQ7Z4L5 1316 aa22.63■■□□□ 1.21
PDE8A-204ENST00000478717 BRPF1P55201 1214 aaPredicted RBP22.63■■□□□ 1.21
PDE8A-204ENST00000478717 EIF4A2Q14240 407 aaKnown RBP22.63■■□□□ 1.21
PDE8A-204ENST00000478717 ADAMTS13Q76LX8 1427 aa22.62■■□□□ 1.21
PDE8A-204ENST00000478717 KIF13AQ9H1H9 1805 aa22.61■■□□□ 1.21
PDE8A-204ENST00000478717 HSP90AB2PQ58FF8 381 aa22.61■■□□□ 1.21
PDE8A-204ENST00000478717 KIAA1211Q6ZU35 1233 aa22.6■■□□□ 1.21
PDE8A-204ENST00000478717 CHMP5Q9NZZ3 219 aa22.6■■□□□ 1.21
PDE8A-204ENST00000478717 NUCB1Q02818 461 aa22.6■■□□□ 1.21
PDE8A-204ENST00000478717 KRT24Q2M2I5 525 aa22.59■■□□□ 1.21
PDE8A-204ENST00000478717 LMOD3Q0VAK6 560 aa22.59■■□□□ 1.21
PDE8A-204ENST00000478717 PDCL3Q9H2J4 239 aa22.59■■□□□ 1.21
PDE8A-204ENST00000478717 ARHGAP45Q92619 1136 aa22.58■■□□□ 1.21
PDE8A-204ENST00000478717 ARID3AQ99856 593 aa22.58■■□□□ 1.21
PDE8A-204ENST00000478717 MCM10Q7L590 875 aa22.58■■□□□ 1.2
PDE8A-204ENST00000478717 ANKRD45Q5TZF3 282 aa22.57■■□□□ 1.2
PDE8A-204ENST00000478717 CHD1LQ86WJ1 897 aa22.57■■□□□ 1.2
PDE8A-204ENST00000478717 C22orf23Q9BZE7 217 aa22.57■■□□□ 1.2
PDE8A-204ENST00000478717 MON2Q7Z3U7 1717 aa22.56■■□□□ 1.2
PDE8A-204ENST00000478717 PLEKHG3A1L390 1219 aa22.55■■□□□ 1.2
PDE8A-204ENST00000478717 SIRT2Q8IXJ6 389 aa22.55■■□□□ 1.2
PDE8A-204ENST00000478717 AMOTL2Q9Y2J4 779 aa22.55■■□□□ 1.2
PDE8A-204ENST00000478717 UBR1Q8IWV7 1749 aa22.55■■□□□ 1.2
PDE8A-204ENST00000478717 C3P01024 1663 aa22.54■■□□□ 1.2
PDE8A-204ENST00000478717 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.54■■□□□ 1.2
PDE8A-204ENST00000478717 TPM2P07951 284 aa22.54■■□□□ 1.2
PDE8A-204ENST00000478717 KNDC1Q76NI1 1749 aa22.53■■□□□ 1.2
PDE8A-204ENST00000478717 A0A0U1RQG5 324 aaPredicted RBP22.53■■□□□ 1.2
PDE8A-204ENST00000478717 DLG5Q8TDM6 1919 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms