RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 USP6P35125 1406 aa23.62■■□□□ 1.37
LETM1-202ENST00000466175 BRINP3Q76B58 766 aa23.61■■□□□ 1.37
LETM1-202ENST00000466175 C1orf167Q5SNV9 1468 aa23.6■■□□□ 1.37
LETM1-202ENST00000466175 PPM1GO15355 546 aaPredicted RBP23.6■■□□□ 1.37
LETM1-202ENST00000466175 IL13P35225 146 aa23.6■■□□□ 1.37
LETM1-202ENST00000466175 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
LETM1-202ENST00000466175 CALD1Q05682 793 aaKnown RBP23.59■■□□□ 1.37
LETM1-202ENST00000466175 ORAI2Q96SN7 254 aa23.59■■□□□ 1.37
LETM1-202ENST00000466175 FMN2Q9NZ56 1722 aa23.59■■□□□ 1.37
LETM1-202ENST00000466175 ANKARQ7Z5J8 1434 aa23.59■■□□□ 1.37
LETM1-202ENST00000466175 RGPD8O14715 1765 aaPredicted RBP23.59■■□□□ 1.37
LETM1-202ENST00000466175 EMILIN1Q9Y6C2 1016 aa23.59■■□□□ 1.37
LETM1-202ENST00000466175 OVOS2A0A0J9YW53 1432 aa23.58■■□□□ 1.37
LETM1-202ENST00000466175 OVOS2Q6IE36 1432 aa23.58■■□□□ 1.37
LETM1-202ENST00000466175 PRKAR2BP31323 418 aa23.57■■□□□ 1.36
LETM1-202ENST00000466175 DDX17Q92841 729 aaKnown RBP23.57■■□□□ 1.36
LETM1-202ENST00000466175 SSH2Q76I76 1423 aa23.57■■□□□ 1.36
LETM1-202ENST00000466175 PHLPP1O60346 1717 aa23.56■■□□□ 1.36
LETM1-202ENST00000466175 NFE2L2Q16236 605 aa23.55■■□□□ 1.36
LETM1-202ENST00000466175 ESCO1Q5FWF5 840 aa23.55■■□□□ 1.36
LETM1-202ENST00000466175 USP31Q70CQ4 1352 aa23.55■■□□□ 1.36
LETM1-202ENST00000466175 ZRANB1Q9UGI0 708 aa23.55■■□□□ 1.36
LETM1-202ENST00000466175 LMOD3Q0VAK6 560 aa23.54■■□□□ 1.36
LETM1-202ENST00000466175 ZNF428Q96B54 188 aa23.53■■□□□ 1.36
LETM1-202ENST00000466175 FBLN1P23142 703 aa23.51■■□□□ 1.35
LETM1-202ENST00000466175 FRAT1Q92837 279 aaPredicted RBP23.51■■□□□ 1.35
LETM1-202ENST00000466175 CLUAP1Q96AJ1 413 aa23.51■■□□□ 1.35
LETM1-202ENST00000466175 EXOSC9Q06265 439 aaKnown RBP23.5■■□□□ 1.35
LETM1-202ENST00000466175 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
LETM1-202ENST00000466175 ZKSCAN2Q63HK3 967 aa23.49■■□□□ 1.35
LETM1-202ENST00000466175 TSR2Q969E8 191 aaKnown RBP23.48■■□□□ 1.35
LETM1-202ENST00000466175 NHSL1Q5SYE7 1610 aa23.48■■□□□ 1.35
LETM1-202ENST00000466175 AHDC1Q5TGY3 1603 aaPredicted RBP23.48■■□□□ 1.35
LETM1-202ENST00000466175 PANK1Q8TE04 598 aa23.48■■□□□ 1.35
LETM1-202ENST00000466175 COL16A1Q07092 1604 aaPredicted RBP23.47■■□□□ 1.35
LETM1-202ENST00000466175 FOXO3O43524 673 aa23.47■■□□□ 1.35
LETM1-202ENST00000466175 HMOX1P09601 288 aa23.47■■□□□ 1.35
LETM1-202ENST00000466175 PDE4AP27815 886 aa23.47■■□□□ 1.35
LETM1-202ENST00000466175 ANP32AP39687 249 aaKnown RBP23.47■■□□□ 1.35
LETM1-202ENST00000466175 XPCQ01831 940 aaPredicted RBP23.47■■□□□ 1.35
LETM1-202ENST00000466175 ALDH1L2Q3SY69 923 aa23.47■■□□□ 1.35
LETM1-202ENST00000466175 NGDNQ8NEJ9 315 aaKnown RBP23.47■■□□□ 1.35
LETM1-202ENST00000466175 COG6Q9Y2V7 657 aa23.47■■□□□ 1.35
LETM1-202ENST00000466175 PMFBP1Q8TBY8 1022 aa23.46■■□□□ 1.35
LETM1-202ENST00000466175 BACH2Q9BYV9 841 aa23.46■■□□□ 1.35
LETM1-202ENST00000466175 GNAI1P63096 354 aa23.45■■□□□ 1.34
LETM1-202ENST00000466175 MYT1Q01538 1121 aa23.45■■□□□ 1.34
LETM1-202ENST00000466175 IFT57Q9NWB7 429 aa23.45■■□□□ 1.34
LETM1-202ENST00000466175 PHACTR3Q96KR7 559 aa23.44■■□□□ 1.34
LETM1-202ENST00000466175 SMC4Q9NTJ3 1288 aa23.44■■□□□ 1.34
LETM1-202ENST00000466175 USP54Q70EL1 1684 aa23.44■■□□□ 1.34
LETM1-202ENST00000466175 KIF16BQ96L93 1317 aa23.44■■□□□ 1.34
LETM1-202ENST00000466175 IPO8O15397 1037 aaKnown RBP23.43■■□□□ 1.34
LETM1-202ENST00000466175 PHF8Q9UPP1 1060 aa23.43■■□□□ 1.34
LETM1-202ENST00000466175 BRPF1P55201 1214 aaPredicted RBP23.42■■□□□ 1.34
LETM1-202ENST00000466175 EIF4A2Q14240 407 aaKnown RBP23.42■■□□□ 1.34
LETM1-202ENST00000466175 DZIP1LQ8IYY4 767 aaKnown RBP23.42■■□□□ 1.34
LETM1-202ENST00000466175 RGPD1P0DJD0 1748 aa23.42■■□□□ 1.34
LETM1-202ENST00000466175 MVPQ14764 893 aaKnown RBP23.41■■□□□ 1.34
LETM1-202ENST00000466175 FTSJ3Q8IY81 847 aaKnown RBP23.41■■□□□ 1.34
LETM1-202ENST00000466175 KIF24Q5T7B8 1368 aa23.41■■□□□ 1.34
LETM1-202ENST00000466175 DLG5Q8TDM6 1919 aa23.41■■□□□ 1.34
LETM1-202ENST00000466175 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
LETM1-202ENST00000466175 KIF1AQ12756 1690 aa23.41■■□□□ 1.34
LETM1-202ENST00000466175 ANP32EQ9BTT0 268 aa23.41■■□□□ 1.34
LETM1-202ENST00000466175 BCL2L13Q9BXK5 485 aa23.41■■□□□ 1.34
LETM1-202ENST00000466175 SBNO1A3KN83 1393 aa23.4■■□□□ 1.34
LETM1-202ENST00000466175 SSH1Q8WYL5 1049 aa23.4■■□□□ 1.34
LETM1-202ENST00000466175 ARHGEF10O15013 1369 aa23.39■■□□□ 1.34
LETM1-202ENST00000466175 FLT4P35916 1363 aa23.39■■□□□ 1.34
LETM1-202ENST00000466175 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.33
LETM1-202ENST00000466175 MSH5O43196 834 aa23.39■■□□□ 1.33
LETM1-202ENST00000466175 ZNF853P0CG23 659 aa23.39■■□□□ 1.33
LETM1-202ENST00000466175 PIK3C2AO00443 1686 aa23.39■■□□□ 1.33
LETM1-202ENST00000466175 RLBP1P12271 317 aa23.38■■□□□ 1.33
LETM1-202ENST00000466175 ATF7IPQ6VMQ6 1270 aa23.38■■□□□ 1.33
LETM1-202ENST00000466175 SOS2Q07890 1332 aaPredicted RBP23.37■■□□□ 1.33
LETM1-202ENST00000466175 CFAP44Q96MT7 982 aa23.37■■□□□ 1.33
LETM1-202ENST00000466175 PXDNQ92626 1479 aa23.36■■□□□ 1.33
LETM1-202ENST00000466175 ERICH6Q7L0X2 663 aa23.36■■□□□ 1.33
LETM1-202ENST00000466175 RWDD1Q9H446 243 aaPredicted RBP23.36■■□□□ 1.33
LETM1-202ENST00000466175 DDX19BQ9UMR2 479 aa23.36■■□□□ 1.33
LETM1-202ENST00000466175 IGHDP01880 384 aa23.35■■□□□ 1.33
LETM1-202ENST00000466175 SULT6B1Q6IMI4 303 aa23.35■■□□□ 1.33
LETM1-202ENST00000466175 JCADQ9P266 1359 aa23.35■■□□□ 1.33
LETM1-202ENST00000466175 LRRC59Q96AG4 307 aaKnown RBP23.34■■□□□ 1.33
LETM1-202ENST00000466175 IPO9Q96P70 1041 aaKnown RBP23.34■■□□□ 1.33
LETM1-202ENST00000466175 MAP3K19Q56UN5 1328 aa23.34■■□□□ 1.33
LETM1-202ENST00000466175 TRIM27P14373 513 aa23.33■■□□□ 1.33
LETM1-202ENST00000466175 HAP1P54257 671 aaPredicted RBP23.33■■□□□ 1.33
LETM1-202ENST00000466175 PSME1Q06323 249 aa23.33■■□□□ 1.33
LETM1-202ENST00000466175 KRT28Q7Z3Y7 464 aa23.33■■□□□ 1.33
LETM1-202ENST00000466175 ARHGAP45Q92619 1136 aa23.33■■□□□ 1.33
LETM1-202ENST00000466175 FAM161AQ3B820 660 aa23.33■■□□□ 1.32
LETM1-202ENST00000466175 CHMP4BQ9H444 224 aaKnown RBP23.33■■□□□ 1.32
LETM1-202ENST00000466175 NOB1Q9ULX3 412 aaKnown RBP23.33■■□□□ 1.32
LETM1-202ENST00000466175 LAS1LQ9Y4W2 734 aaKnown RBP23.33■■□□□ 1.32
LETM1-202ENST00000466175 HSP90AB2PQ58FF8 381 aa23.32■■□□□ 1.32
LETM1-202ENST00000466175 VAMP4O75379 141 aa23.3■■□□□ 1.32
LETM1-202ENST00000466175 NLRP6P59044 892 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms